Alteromonas stellipolaris R10SW13: AVL56_16635
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Entry
AVL56_16635 CDS
T04403
Name
(GenBank) ligand-gated channel
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
aaw
Alteromonas stellipolaris R10SW13
Brite
KEGG Orthology (KO) [BR:
aaw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aaw02000
]
AVL56_16635
Transporters [BR:
aaw02000
]
Other transporters
Pores ion channels [TC:
1
]
AVL56_16635
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Vac_ImportDeg
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
AMJ95771
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All DBs
Position
3902525..3904582
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AA seq
685 aa
AA seq
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MSQFSLFRSTTALIILFFLSAISSSHADTFKHSDVQLNQEGHKDEHGEQKHDQREAHDDH
HDEVEKILIQATRSGRIADEQPIRVELINREEIEEKAAMRPGNISMLVAETGGVRMQTTS
PALGSANIRLQGLYGRYTQLLADGLPLYGNQAASIGLLQIPPTDLGRIEIIKGSASSLYG
GSALGGVINLVSRQPGDEFSGETLLNATTRDGQDLTTYFEAPINDSIKTSITAGAHYQNE
QDIDGDGWIDLAGYERYTARPRLFWEGEDGENLYVTTGFMTEQREGGTLEGATVANSEAF
AQTQDSKRIDGGFVFNKPVFDTLTFNARASAMLQEHEHAYGNDFDDDEHESYLAETSLAG
YTDKSDWVVGIAYQSEVFTSHTYPEFDYDYQVPGIFTQVDYELTDILTTSLSARVDEHNE
FGTQFSPRVSLLYRPGDITVRGSYGQGYFAPTPFVEEIEAAGLSRLASIEDLEEEDAETA
SLDVTYTLGNIETSLTLFGSNVDNVTELEAFSSNGTSELDRVRLVNAEGESKIRGSEFLV
RYYWRDVKLTASYLYVDATEVSETNEGRQEIALTPRHSAGFVAMWEQHGSFRTGFEAYYT
GVQRLNDNPYLNESKPYWHLGLMGEITLGRISYFINLENLLNVRQTDEHPLLLPNRAASG
QWTTDIWSRNDGFIANAGIRIKFGH
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaattttcactttttagatcaaccaccgcgttaatcattctgttctttcttagc
gcaatttcatctagtcatgccgacacatttaagcactcggatgtgcaattgaaccaagag
gggcacaaagatgagcatggtgaacaaaaacatgaccaacgtgaagctcatgatgaccat
cacgacgaggttgaaaagattcttattcaagcgacccgttctggccgtatagccgatgag
caacccattcgcgttgaactgattaaccgcgaagaaattgaagaaaaagcggcaatgcgt
ccgggaaatatctctatgctggtagcagaaaccggcggcgtaagaatgcaaaccacctcg
cccgctttaggcagtgccaatattagactgcaaggtttatatggtcgatatacccaattg
cttgcagacggtttaccgttatatggcaaccaagcagcttctatcgggctacttcaaata
ccacctaccgatttgggtcgcatcgaaattataaaagggtctgcctcttccctttacggt
ggctctgccttaggcggtgttattaacttagtgtctcgccagcccggcgatgagtttagt
ggcgaaaccttacttaatgccaccacgcgagacggccaagatctcactacctatttcgaa
gctcccattaacgattcaataaaaacgtcgattaccgcaggcgcgcactaccagaatgaa
caagatattgatggtgacggctggattgatttagcaggttatgaacgctacaccgctcgc
cctcgtcttttttgggaaggggaagatggcgaaaacctttatgtcactactggcttcatg
acagaacaacgtgaaggtggcacgctagagggtgcaaccgttgccaattcagaggcattc
gcgcaaacacaagattcaaagcgcattgacggtgggtttgtatttaacaaaccggtattc
gatacacttacctttaatgctcgcgcctcagcgatgcttcaagagcatgagcacgcgtac
gggaacgactttgacgatgatgaacacgagagctatttagccgaaaccagtctagctggc
tacacggataaaagtgattgggtggtaggcattgcttaccagtcagaggttttcacttcc
cacacatacccagaatttgattacgattatcaggttcctggtattttcactcaagtcgac
tacgagcttactgacatccttaccacatcgcttagcgcccgggtcgacgagcataacgag
ttcggcacccagttcagccctcgggtatcgttactttatcgtccaggcgatattacggta
agaggatcttatggtcagggctactttgctcctactccctttgttgaagaaatagaggca
gccggactatctcgcttagccagtattgaagatttagaagaagaagatgcagaaactgcc
tcgcttgatgtgacttatacgttaggcaatattgaaacgagcttaactttgtttggttca
aacgttgataatgttaccgagttagaggcattttcgagtaatggaacgagtgaactagac
cgagtcaggttagtgaatgctgaaggtgaaagtaaaattcgtggttccgagtttttggtg
cgctattactggcgtgatgtaaagctaaccgcgagttacctgtacgttgatgcaactgaa
gtatcagaaacgaatgaaggcagacaagaaattgcacttacgccccgccattcagcaggt
tttgtggccatgtgggaacagcatggcagtttcagaaccggttttgaagcctattacacc
ggcgtacagcgcttgaacgacaacccttatttaaatgagtctaaaccttactggcattta
ggtttaatgggagaaatcactctgggccgcattagttacttcattaacttagaaaaccta
ttgaatgtacgccaaaccgacgaacacccattgcttttgcctaaccgcgccgccagcgga
caatggactactgatatatggtcccgtaacgatggctttattgccaatgcaggaataaga
attaaatttggccactag
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