Alteromonas stellipolaris R10SW13: AVL56_18515
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Entry
AVL56_18515 CDS
T04403
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
aaw
Alteromonas stellipolaris R10SW13
Brite
KEGG Orthology (KO) [BR:
aaw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aaw02000
]
AVL56_18515
Transporters [BR:
aaw02000
]
Other transporters
Pores ion channels [TC:
1
]
AVL56_18515
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Phage_OMP
Motif
Other DBs
NCBI-ProteinID:
AMJ96109
LinkDB
All DBs
Position
4348550..4350928
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AA seq
792 aa
AA seq
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MLLRPSTLHSSITRALAIGTCMTIGFAASAQEAEPAEPKGLEKITVTSQKRVESLNEVPV
AVSVLREDQINAAFSNNIEGLQALVPSVSFRKGNTTRNSAITVRGIGTISFSVAAEPSVS
TVVDGVVLGRAGQAFVDLYDLERIEVLRGPQGTLFGKNASAGVVNITTKRPSDEFEGTAE
VSLFQDNEYRLKTSVSGALNDNVNGSLTVLKSQFDGYIKNVYNNEMTNGYDKEGVRAMLD
IEAGNDTDVLFIFENVKSDDSCCADLELSPSGRHPDSEALPNSTGTGDLDLEQRLIDHDF
ETRTLDETTGFSMQVDTMFGDHQFTSITAYRDWDNTEFREGDFTSTAGTRPFPVFGEPFQ
LHDIGAQNWKQTSQEFRIASPVGEAFDYQVGAFWWTQKSERNFTRDASCQNNAGQFPAAI
STYLTDTFGIADPTDDQVNQYIADEGLSCNSNDIVSATAYMETQFDNWALFADGKYHIND
DLRLLFGIRYTDDEVSYSHNRSSNDQYSRTGVGVRSFDTDYSGKTDETNVSGKLGVQYDL
TDNSMTYFTFSQGYKGPAFNVFYNMSDTDTLPIGEETSDAYELGYKYASRSVIFNAAIFR
TDIDGFQANNSELLDSVTITRLTNAGSVTTQGFEFDFMWQATDNLSLTGGLSKVDAEVDE
FLCPVSDPTCTGSSGADLPFSPDLKYSVTGEYIWEMDNMDIILNGSYVYTDEMFVGAPGA
FAEENDPAVLPDYAIVNASLAFSFQDDDYRISLIGKNLTDESYVTTYSGDNFRYQIPRDA
DRYFGVQLRAKF
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgttactaagacctagcacactacattcaagtattactcgggcattagccattggtact
tgtatgaccattggctttgctgccagcgcacaagaagcagaacctgctgagcctaaaggg
ctcgaaaaaataaccgttacctcacaaaagcgtgtagaaagcttaaatgaagtgccggtt
gcggtttctgttttacgcgaagaccaaattaacgctgcattttctaacaacattgaaggt
ctacaagcattagtaccatcggtcagtttccgaaaaggtaacaccactcggaactccgcc
attaccgttcgtggtattgggactatttcatttagtgtggctgctgagccgagtgtctct
acagtagtagacggcgttgtgttaggccgtgccggtcaagcgtttgttgacttatatgac
cttgagcgcattgaggtattacgtggcccgcagggtaccttgtttggtaaaaatgcgtct
gccggtgtggttaacattactactaaacgcccttctgatgaatttgaaggcactgcggaa
gtatccttgtttcaagacaatgaataccgtttaaaaaccagtgtatctggtgcgttaaac
gataatgtaaacggtagcctaaccgtacttaaatcacagttcgacggctatattaaaaac
gtttataacaatgaaatgaccaacggctacgataaagaaggcgttcgtgccatgcttgat
atcgaagcgggtaacgacactgatgtgcttttcatctttgaaaacgtgaaatctgatgat
agctgttgtgccgatttagaactttcaccaagtggccgtcaccctgattctgaagcacta
cctaacagtactggtactggtgacttagatttagaacaacgccttattgatcatgatttt
gaaacgcgcacgttagatgaaaccacaggtttctcaatgcaagttgacaccatgtttggt
gaccatcagtttacttcaatcacggcttaccgcgattgggacaatacagaattccgtgaa
ggtgacttcacatcaacagcaggcacacgtcctttccctgtgtttggcgaaccgttccag
ttacatgatattggcgcacaaaactggaaacaaacctcacaagaattccgcattgcatcg
cctgtgggtgaggcattcgattatcaagtgggagccttttggtggacccaaaaatctgag
cgtaactttacccgtgatgcaagttgtcaaaataacgcaggtcaattcccagcggctatc
agtacatatttaaccgacaccttcggtattgcagacccaactgatgatcaagtgaatcag
tacattgctgatgaaggcctaagctgtaactcaaacgatattgtgagcgcaacggcttac
atggaaacgcagtttgataactgggcattatttgctgatggtaaataccatattaatgat
gacttacgtctgctattcggtattcgttatactgatgatgaagttagctactcacataac
cgcagcagtaatgaccaatacagtcgtactggtgtaggtgtacgtagcttcgatactgac
tacagcggtaagactgatgaaacaaatgtatcgggcaagttgggtgtgcagtatgactta
accgacaacagcatgacgtattttaccttctcacaaggttataaaggccctgcgtttaac
gtgttctacaacatgtcagacacagataccttacctattggtgaagaaacatcagatgcc
tatgagttagggtataaatacgcaagccgcagcgtaatctttaacgccgctatctttaga
actgatattgacggtttccaagcaaataactcagagttacttgattcagttactatcact
cgcttaaccaacgcaggatcggtgaccacgcaaggtttcgagtttgacttcatgtggcaa
gcaacagataacctatcgttaactggtggtttatcgaaagtagatgctgaagttgatgag
ttcttatgcccagttagtgacccaacctgtactggtagttcaggcgctgacttgcctttc
tcgccagacctaaaatactcagttaccggtgagtacatttgggaaatggacaacatggac
atcattttaaacggctcgtacgtttacactgatgaaatgttcgtgggtgcacctggtgca
tttgcagaagaaaacgacccggcagtattacctgactacgctattgtgaatgcaagctta
gcgttttcgttccaagatgatgactaccgcatcagccttatcggtaagaacttaactgac
gaaagctatgtaaccacctacagcggcgataacttccgttatcaaatccctcgtgatgca
gaccgttacttcggtgtgcagctgcgcgctaagttctaa
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