Alteromonas stellipolaris R10SW13: AVL56_18895
Help
Entry
AVL56_18895 CDS
T04403
Name
(GenBank) transcriptional regulator
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
aaw
Alteromonas stellipolaris R10SW13
Pathway
aaw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aaw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AVL56_18895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aaw03000
]
AVL56_18895
03400 DNA repair and recombination proteins [BR:
aaw03400
]
AVL56_18895
Enzymes [BR:
aaw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AVL56_18895
Transcription factors [BR:
aaw03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AVL56_18895
DNA repair and recombination proteins [BR:
aaw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AVL56_18895
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
DUF6233
Motif
Other DBs
NCBI-ProteinID:
AMJ96175
LinkDB
All DBs
Position
complement(4429628..4431040)
Genome browser
AA seq
470 aa
AA seq
DB search
MNTDIKDSAHVDNEHRDTYAKARVSRDARFDGRFFVAVKTTGIFCRPICPAKLPDEKNVA
YYNHAAKAMSDGFRPCLRCRPDSAPSSFAWLGVGTTVTRALTLLSDIPVQSISTISSRLG
ISERYLNKLMVSHTGLSPKQYQDLQRVLFAKQLLQQSTMTLTDIAFSAGYASTRQLQRAV
QTYCKKTPTELRSKRHSALPEISLRLHFRPPYHWPQVRDFLALRAIRGVEMVFENTYSRY
ISVKGESGFISATFNDRANGFDVKMRLPNLAYVYKTVEQIKQLLDLHAAPELIEKSLLAA
GLPDNLLTKGLRLPGTWTVFESGCRAIVGQQVSVKAAINQAGLLAQHLGAVVTEEPVEPN
QHYCFPEPEAVANSDLAFLRMPNARKHALRNFAVLFCNGNQPTYDEILSIKGVGQWTLDY
LKMRGERDPDVYLAGDLIIRKMAEKYPVLPQEAAPWQSYLTLQLWQLSNS
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaacacggacataaaagattcagcgcatgtagacaatgagcaccgcgatacttacgct
aaagctagggtaagtagagatgcccgttttgatggccgcttttttgtggcggtgaaaacc
acaggtatattttgccggccaatttgccctgccaaattgcctgatgaaaagaacgtggcc
tactataaccatgctgctaaagccatgagtgatggctttcgtccctgtttacgatgcagg
ccagatagcgccccgtcttcttttgcatggttaggtgtaggcacaacagtgacaagagcg
ctaacgctattaagtgatatacccgtgcagtctatatccaccatttcaagccgattgggt
ataagtgagcgttacttaaataaactcatggtgtcgcatacggggttgtctcctaaacaa
tatcaagatttgcaacgggtgttatttgcaaagcagctgctccagcagtccaccatgacg
cttactgatattgcttttagcgcggggtacgcctctacaaggcagcttcagcgggcagtg
caaacttattgcaaaaaaacgcctaccgaattacgaagtaaacgccattctgcactacct
gaaatatcccttaggttacacttcaggcctccttaccattggccgcaagtcagagatttt
cttgccctgcgggctattcggggcgtagaaatggtgttcgaaaatacctatagccggtat
atcagtgttaaaggcgaatcgggatttatcagtgcgactttcaacgaccgcgcaaatggc
ttcgatgtaaaaatgcgtttgccaaatttagcttacgtgtacaaaacggttgaacaaata
aagcagctgctcgatttacatgccgccccagagttaattgaaaaatcgctattagcagcg
ggcttgcctgataacttactgactaaagggttgcgccttcctggtacctggaccgtattt
gaaagtggatgcagagctattgtagggcaacaagtcagtgtaaaagcggcaatcaatcaa
gcggggctgcttgcacagcatttaggggcggtagtcactgaggagcctgttgagccaaac
caacattattgctttcctgaacccgaagcggtggcaaacagtgatttagcttttttgcgc
atgccaaatgctcgtaagcatgcacttcgtaattttgcggtgctattttgtaacggtaac
cagcctacttatgatgaaatattgtcaatcaaaggcgttggtcaatggacactagattac
cttaagatgcgaggtgaacgtgatcctgatgtgtatttggctggcgaccttattataaga
aaaatggccgagaagtatccggtgttgccgcaagaggcggcgccatggcaaagctactta
acactacaattgtggcagttgagtaatagttaa
DBGET
integrated database retrieval system
