Alteromonas stellipolaris R10SW13: AVL56_19875
Help
Entry
AVL56_19875 CDS
T04403
Symbol
trmE
Name
(GenBank) tRNA uridine(34) 5-carboxymethylaminomethyl synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
aaw
Alteromonas stellipolaris R10SW13
Brite
KEGG Orthology (KO) [BR:
aaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aaw03016
]
AVL56_19875 (trmE)
Transfer RNA biogenesis [BR:
aaw03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
AVL56_19875 (trmE)
Prokaryotic type
Methyltransferases
AVL56_19875 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
Ras
AIG1
AAA_28
ABC_tran
Gtr1_RagA
Arf
Roc
SRPRB
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AMJ96355
LinkDB
All DBs
Position
complement(4644337..4645725)
Genome browser
AA seq
462 aa
AA seq
DB search
MDSHIITTDTITAQATAPGRGGVGIVRVSGPHAKTIAATLVPTALTPRLATYTPFVDSQQ
NVIDQGIALFFKGPNSFTGEDVLELQGHGGQVVMDMLIDAVLSTGKARLANPGEFSEQAF
INDKLDLAQAEAIADLIDASSKQAARSALRSLQGEFSTQIQTLSDQIVHLRMYVEAAIDF
PEEEIDFLSDGKVSGDLAAILAHLQVVREQAKQGSLLREGMQVVIAGRPNAGKSSLLNAL
AGRDSAIVTEIAGTTRDVLKEHININGMPVHIIDTAGLRDSPDKVEQIGIERAWQAISEA
DHVLFVTDSTTTDVADPYKIWPEFMARLPEGIPTTVIKNKADLSELEVGLNNVKTEHGDM
PVINISAKESDGIDTLRDHLANTMGFDTTTEGQFIARRRHLDALEKAYQFVVIGEQQLHD
AMAGELLAEELRLAHQSLCEITGEFTSDDLLGKIFSSFCIGK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggattcacatatcatcacaaccgataccattaccgcccaagctactgcccctgggcgc
ggtggagtaggaattgtacgagtatcaggcccacatgctaaaactatagcagccactctg
gtacccacagccctaacacctagattggccacctataccccgtttgtcgatagccaacaa
aatgttatcgaccaaggtatcgcgctattcttcaaagggcctaattcatttacgggcgaa
gatgtattagagctgcaaggtcatggcggtcaggttgtgatggatatgcttattgacgct
gtgttatcgactggcaaagcgcgattagccaacccaggtgagttcagtgaacaagccttt
atcaacgacaagctcgatttagcgcaagctgaggctatcgctgatttaatagatgctagc
tctaaacaagcggcaagaagcgcgctacgttcgttacagggcgagttttcaacccaaata
caaacgttgtctgatcaaattgttcatttacgtatgtacgttgaagccgctatcgacttt
cctgaagaagaaattgatttcttatctgacggcaaagtgtctggcgatctagccgccata
cttgcgcaccttcaagttgtacgagagcaagctaagcaaggaagtctactcagagaaggc
atgcaggtggttatcgccgggcgccctaatgcgggtaaatcaagtttactaaatgcatta
gcaggccgagatagcgccatagtcaccgagattgcaggcactactcgtgatgtattaaaa
gagcatattaatattaacggcatgccggtacacatcattgataccgcaggtcttcgtgat
agcccggacaaagtagaacaaattgggattgagcgagcgtggcaagccattagcgaagcg
gatcacgtactttttgttactgattcaaccactactgatgtggcagatccttataaaatt
tggcctgaatttatggcgcgcttaccagagggtatcccaaccacggtaatcaaaaataaa
gcggatctaagcgagttagaagtaggcctgaataacgtaaaaaccgaacatggcgatatg
ccggttattaatatttcagcaaaagaaagcgacggtatcgataccctgcgagatcatttg
gccaacaccatggggttcgacactaccactgaagggcaattcatcgcccgaagacgccac
cttgatgcgttggaaaaggcatatcaatttgtggtgataggcgaacaacaacttcacgat
gctatggccggtgaactacttgcagaagaactgcggttagcccatcagtcattgtgtgaa
atcactggtgaattcacctcagacgacttacttggtaagatattttcatctttctgtatt
ggtaaataa
DBGET
integrated database retrieval system
