Haploplasma axanthum: NCTC10138_00038
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Entry
NCTC10138_00038 CDS
T05950
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aaxa
Haploplasma axanthum
Pathway
aaxa03420
Nucleotide excision repair
aaxa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aaxa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC10138_00038 (pcrA)
03430 Mismatch repair
NCTC10138_00038 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaxa03400
]
NCTC10138_00038 (pcrA)
Enzymes [BR:
aaxa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC10138_00038 (pcrA)
DNA repair and recombination proteins [BR:
aaxa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC10138_00038 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NCTC10138_00038 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_12
Med9
CarD_TRCF_RID
Anticodon_2
ResIII
Motif
Other DBs
NCBI-ProteinID:
VEU79591
UniProt:
A0A449BB81
LinkDB
All DBs
Position
1:complement(29999..32104)
Genome browser
AA seq
701 aa
AA seq
DB search
MNDKKLDYEISRLNNNQRKAVIHENGPLFVVAGAGTGKTKTLTTRIAYLIEKMNVDPNRI
LGVTFTNKAAKEIRHRVNDLIYPNQMGAWLYTFHAFGLRVLRENAVNLNLGYKNDFTVID
EDDALAIIRDIIKKQNIDAKKYPPRMIKNFISNEKTFIRNIDDEVVRDVYDRYKLELIKE
QLMDFDDLIVYTNKLFKENLLVRTKYQTLFTHILIDEFQDTDKVQYEIIKLLNNENTFVV
GDPDQSIYAFRGARYENNQLFVKEFGAEVIVLDENYRSTNNILKAANKLIKNNNSRTTDK
NLVSSFGDGVPIVVHLASDDFDEVRTVTNEIINLTSHKYNYEDIAVLYRNNHLSRLFEHS
FMQTQIPYIIYGGISFYERKEVKDILAYLKVVVDTNSNFYLKRIINTPTRGIGNVTINKL
EEYANFNNMSMFDAIDYVKFSAKTANSLKEFKNIINELKEKIEETKELVNIIDVLFVGSG
YYEFLKEETDDKAKERKENIMELKNVFRQGDWNYEGNNIEKIKQILDELALYTDHDKDNQ
DLNVVKLATVHQVKGLEFKVVFVVALEDGLFPSDRSYMDPFELEEERRIFYVAITRAKER
LYVTNTQRRMVYGQIKNNIPSVFLREIKNDEEKILPKKYSRETINKNTSSDDFKSGDIVV
HDSFGKGVVVEVKDDIITIAFNVEYGIKKLLKNHPSIKKEI
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaatgataaaaaattagattatgagataagtagattaaataataatcaaagaaaagcg
gttatccacgaaaatggaccgctttttgttgtagcaggtgctggaactggtaaaactaaa
actctaacaacaagaatagcttatttaattgaaaaaatgaatgtcgatccaaatagaata
cttggtgtaacatttactaataaagcagcaaaagaaatcagacatcgagttaatgattta
atctatccaaatcaaatgggagcatggctttatacatttcacgcttttggtcttagagta
ttaagagaaaatgctgtaaatttgaatttaggatataaaaatgactttaccgttattgat
gaagatgatgccctagcaattattagagatattattaagaaacaaaatattgatgctaaa
aaatatccaccaagaatgattaaaaattttatttcaaatgaaaaaacttttattagaaat
attgatgatgaagtagttagagatgtttatgacagatataagttagaacttatcaaagaa
caattaatggattttgatgatcttattgtttatacgaataaactatttaaagaaaatctt
ttagtaagaacaaagtatcaaacattgtttacacatatcttaattgatgagtttcaagat
accgataaagttcaatatgaaataattaaacttcttaataacgaaaatacgtttgtagtg
ggagatccagatcaaagtatttatgcatttagaggtgctagatatgaaaataatcaatta
tttgttaaagaattcggtgctgaagttattgttttagatgaaaattatcgctcaacaaat
aatattttaaaagcagctaataaactgattaaaaataataatagtagaacaacagacaag
aatttagtaagtagttttggagatggtgtgcctattgtagttcatcttgcgagtgatgat
tttgatgaagttagaacagttactaatgaaataattaatttgacaagtcataaatataat
tatgaagatattgcagttttatatcgtaataatcatttaagtagattgtttgaacatagt
tttatgcaaacgcaaataccatatattatttatggaggaatttcattctatgaaagaaaa
gaagttaaagatattctcgcatatttaaaggtagttgttgatacaaatagtaatttttat
ttaaaaagaattattaatactccgacaagaggaataggaaatgtaactattaacaaacta
gaagagtatgcaaactttaataatatgtccatgtttgatgcaattgactatgtgaaattt
tcagctaagacagcaaatagtttaaaagaatttaaaaatataataaatgaattaaaagaa
aaaattgaagaaacaaaagaacttgttaatattattgatgttctatttgtaggaagtggt
tattatgagtttttaaaagaagaaactgatgataaggctaaagaacgtaaagaaaatatt
atggaattaaaaaacgtttttagacaaggcgattggaactatgaaggaaataacattgag
aagattaaacaaatattagatgaactagcattatatactgatcatgataaagataatcaa
gatttaaatgttgtaaaactggcaactgttcatcaagttaaaggattagaatttaaagtt
gtttttgttgtagcattagaagatggattatttccaagtgatagatcatatatggatcct
tttgaacttgaggaagaaagaagaattttctacgttgcaattacaagagcaaaagagcgt
ctatatgtaacaaatactcaaagaagaatggtttatggacaaattaagaataatattcct
tctgtatttttaagagaaatcaaaaatgatgaagaaaagattcttcctaaaaagtattca
agagaaacaattaataaaaatacaagttctgatgattttaaatctggagatattgttgtt
catgattcatttggtaaaggtgttgttgttgaagttaaagatgatataataacgattgct
tttaatgttgaatatggaattaagaagttacttaaaaatcatccaagtatcaaaaaagaa
atatag
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