Haploplasma axanthum: NCTC10138_00515
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Entry
NCTC10138_00515 CDS
T05950
Symbol
holB
Name
(GenBank) DNA polymerase III delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
aaxa
Haploplasma axanthum
Pathway
aaxa03030
DNA replication
aaxa03430
Mismatch repair
aaxa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aaxa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10138_00515 (holB)
03430 Mismatch repair
NCTC10138_00515 (holB)
03440 Homologous recombination
NCTC10138_00515 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aaxa03032
]
NCTC10138_00515 (holB)
03400 DNA repair and recombination proteins [BR:
aaxa03400
]
NCTC10138_00515 (holB)
Enzymes [BR:
aaxa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC10138_00515 (holB)
DNA replication proteins [BR:
aaxa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC10138_00515 (holB)
DNA repair and recombination proteins [BR:
aaxa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC10138_00515 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DUF7881
M16C_assoc
DASH_Dad1
Motif
Other DBs
NCBI-ProteinID:
VEU80158
UniProt:
A0A449BCK1
LinkDB
All DBs
Position
1:512153..513094
Genome browser
AA seq
313 aa
AA seq
DB search
MNKIVEFFENAHKKKRLSHLYLLSGEARKENLDLMYEIAYIVLKDFDLRDNLKELIKEDN
HSQIYHIKPDGNVIKKDQIIGLQNEFTKTSLLKGPRIYIIEDVDLISTSAANSLLKFMEE
PESNEVYGFLMTANLSNVLKTIISRSQVIRINASNVDIYDELIRKEIDTYVAKNISELTK
SLEEANEYSEEFNIISSIEFIKSYMANWYKDGYIPSIELNKINGNIMYDRKYYKVFLEIL
LINFFDLWHFILKEDIIFNELEDEYQKQAKIKKSEDILKIIKYIQDEITKQVYYINISLS
LEVLFTNIQKVGG
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaatagttgaattttttgagaatgcccacaaaaagaaacgactttctcattta
tatcttttaagtggggaagcaagaaaagaaaatttggatttaatgtatgaaattgcctat
attgttttaaaagactttgatttaagagataatcttaaagaattgataaaagaagataat
catagtcaaatatatcatataaaaccagatggaaatgttataaaaaaagatcaaataata
ggactacaaaatgaatttacaaaaacatcacttcttaaaggtccaagaatttatataatt
gaagatgttgatttaataagtacatcagcagcaaatagtttgttaaagtttatggaagaa
cctgaaagtaatgaagtttatggtttcttaatgacagcaaatctttcaaatgttttaaaa
acaattatatctagaagccaagtaattagaattaatgctagtaatgttgatatttatgat
gagttgattagaaaagaaattgatacttatgttgctaaaaatatttcagagttaacaaaa
tctcttgaagaagcaaatgaatatagtgaagagtttaatattataagctcaattgagttt
atcaaaagttatatggctaattggtataaagatggctatattccatcaatagaacttaat
aagataaatggaaatattatgtatgatagaaaatattacaaagtttttttggaaatatta
ttaattaatttctttgatttatggcactttatattaaaagaagatataatatttaatgaa
ctagaagatgaataccaaaaacaagcgaaaataaaaaagagtgaagatattttaaagatt
attaagtatattcaagatgaaataactaaacaagtttattatattaatataagtttgtca
ttagaagttttatttacaaatattcaaaaagtgggtggttag
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