Haploplasma axanthum: NCTC10138_01021
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Entry
NCTC10138_01021 CDS
T05950
Symbol
uvrB_2
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
aaxa
Haploplasma axanthum
Pathway
aaxa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aaxa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC10138_01021 (uvrB_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaxa03400
]
NCTC10138_01021 (uvrB_2)
DNA repair and recombination proteins [BR:
aaxa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC10138_01021 (uvrB_2)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC10138_01021 (uvrB_2)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_5
AAA_7
DUF815
AAA
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
VEU80642
UniProt:
A0A449BDY4
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All DBs
Position
1:1069326..1071284
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AA seq
652 aa
AA seq
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MFKLVSPYKPSGDQPQAIEKLTKNFNDGLKEQILLGATGTGKTFTIANIIEKMGKKTLVL
AHNKTLAGQLYGELKEMFPDNRVEYFISYYDYYQPEAYVVSSDTYIEKDSSINDEIDELR
HSATASLLQRDDVIVVASVSCIYGIGDPDDYKNSVIFVRVGDDYGRNYFINKLVELTYVR
NDIDFQRGTFRVRGDIVEVIPVNERSEGVRVSFFGDEIETIAKFDVLTGKTIEQVTFVSI
YPATHFMTNPDKIKETIRRIREELEERVKYFRSNDKLLEAQRIEMRTKYDLEMLEEIGTC
SGVENYSRHLSLRGEGETPATLIDFFGDDYLLIIDESHVTVPQVRGMYFGDRSRKENLVN
YGFRLPSALDNRPLQFDEFEKKKSNVIYLSATPGPYELEKHLPVVEQIIRPTYLLDPEIE
IRPSSNQMDDLYFEIKKRAENNERVLVTTLTIRMSEELTSYFKQLGLKVAYLHSEIKSLE
RIAILRDLRLGKYDCLIGINLLREGLDLPEVSLVAILDADKQGFLRSERSLIQTIGRAAR
NQNGHVIMYADTISSAMEYAINETNRRRKIQTEYNEKNHTKPITVSKTIKDNISIKEEII
EKYTEDKKVKLTKKEKAFMIDDLEKQMRDAAKNLDFEKAAELRDLIFELRSE
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaattagtatctccctataaacctagtggtgatcaaccacaggcaatagaaaaa
ttaactaaaaattttaatgatggcttaaaggagcagatattactgggtgctacaggtact
ggtaagacctttacaatagctaatattatagagaaaatgggtaagaaaacattagtttta
gcccacaataaaacccttgctggtcagttatacggcgaactcaaggagatgttccctgat
aatagagtggaatatttcatctcatactatgattattatcaacctgaagcgtatgtagtc
tctagtgacacatatattgaaaaagattcatcaattaatgatgaaatagatgaattaaga
catagtgcaaccgcatctcttcttcaaagagatgatgttattgttgttgcatcagtatct
tgtatttatggtattggggatcctgatgactataaaaactctgttatttttgttagagtt
ggtgatgattacggtagaaattattttattaataagcttgtagaacttacatatgttaga
aatgacatagattttcaaagaggtacttttagagtacgtggtgatatagttgaagttatt
ccggttaatgaaagaagtgaaggagttagagtttcattctttggtgatgaaattgaaact
attgctaagtttgatgttttaacaggaaaaacaatagaacaagtaacatttgtttcaatt
tatccagcaactcactttatgactaatcctgataaaattaaagaaacaattagaagaatt
agagaagaactagaagaaagagttaaatattttagatcaaatgataaacttttagaagca
caacgtattgaaatgcgaactaaatatgatttagagatgttagaagagataggaacatgt
agtggtgttgaaaactattcaagacatttatcacttcgtggtgaaggagaaacaccagca
acactaatcgatttctttggagatgattatttattaattattgatgaatctcatgttaca
gttccacaagtaagaggaatgtattttggagatagatcaagaaaagaaaacttagtaaat
tatggatttagattaccaagtgcacttgataatagacctttacaatttgatgaatttgag
aaaaagaaatcaaatgtaatttatttatcagcaacacctggtccatatgagttagaaaaa
catcttccagttgttgaacaaattattagaccaacatatttattagacccagaaattgaa
attagaccaagtagtaatcaaatggatgatttatattttgaaattaagaaacgtgctgaa
aataatgaacgtgttttagtaacaactctaacaattagaatgagtgaagaattaacaagt
tatttcaagcaattgggattaaaagttgcgtatctacatagtgaaattaaatcattagaa
agaattgctattctgcgtgatttaagattaggtaaatatgattgcttaatagggattaac
ttattaagagaaggtctagatttacctgaggtttcacttgttgctatattagatgctgat
aagcaaggtttcttaagaagtgagcgaagtttaattcaaacaatcggacgtgcggctaga
aatcaaaatgggcatgtaataatgtatgctgatacaatctcatcagcaatggaatatgca
attaatgaaactaatcgtagaagaaagattcaaacagaatacaatgaaaagaatcatact
aaaccaataacggtaagtaagactattaaagataatatttcaattaaagaagaaattatt
gaaaaatatactgaagataaaaaagttaaattaactaagaaagaaaaagcattcatgatt
gatgatcttgaaaaacaaatgcgtgatgctgctaaaaatcttgactttgaaaaagctgca
gaacttagagatttaatttttgaacttaggagcgaataa
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