Haploplasma axanthum: NCTC10138_01169
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Entry
NCTC10138_01169 CDS
T05950
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aaxa
Haploplasma axanthum
Pathway
aaxa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aaxa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC10138_01169 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaxa03019
]
NCTC10138_01169 (pnp)
03016 Transfer RNA biogenesis [BR:
aaxa03016
]
NCTC10138_01169 (pnp)
Enzymes [BR:
aaxa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NCTC10138_01169 (pnp)
Messenger RNA biogenesis [BR:
aaxa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NCTC10138_01169 (pnp)
Transfer RNA biogenesis [BR:
aaxa03016
]
Prokaryotic type
tRNA degradation factors
NCTC10138_01169 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
SPATA25
Thioredoxin_6
Motif
Other DBs
NCBI-ProteinID:
VEU80784
UniProt:
A0A449BE97
LinkDB
All DBs
Position
1:complement(1229146..1231278)
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AA seq
710 aa
AA seq
DB search
MSLKTFETNFGGRTLKVEIGEVAKQTNASALLHYGGTSVLSVVVNKNEPTDGDFFPLMVL
YQEKLYAAGKIPGGFLKREGRATEHETLISRLIDRPVRPLFADGFKNDVQIINTVLSSDP
TCPPEMVALLGSSLVLQLSDLPFKGPVSGVTLGMINNEFVVNPTEEEMETSILDLTVAGT
TEALNMVEASAKEVSEELMLNALSHAHSIIKELNEFQNVISKELGKVKKEYDVFTLDKDI
EKEVLDYIGTSLVDAVSIFDKLERYAKIDEIKAKTLEHFKDRPFFKIIDNISVYDYKKER
EFLGHVEATLNKVVKNEVRRLITKEKIRPDGRKTDEIRPLASRVGLLERTHGSSLFTRGQ
TQALAVVTLGGLGEGKIIDDIRDEDNKRFMLHYNFPQFSVGETGRYGAPGRREIGHGALG
EKAIKNILPNEEEFPYTIRVVSEILESNGSSSQATICAATMALMNAGVPIKAPVAGIAMG
LVMEGKDYTILTDIQGMEDHEGDMDFKVAGSREGITALQMDIKIDGITNEIFKEALEQAK
VARFQLLDHMHSTIAEVSSELSPYAPKVKLIKIDPEKIRDVIGTGGKIITQIIEDNNNVK
IDIEQDGRVFIMHSETEVINRVANIILNIVRVPEVGKIYEGKVVRVEKFGAFVELWAGTE
GLVHISKLSKDRVNEVTDVVNVGDAILVKCIKIDEKGRVDLSRKDALEDK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgagtctaaagacttttgaaacaaattttgggggaagaactctaaaagttgaaattggc
gaagttgcaaaacaaactaatgcctctgctttattacattatggtggaacatctgttcta
agtgtagttgttaataaaaacgaaccaactgatggtgacttttttcctttaatggtttta
taccaagaaaaattatatgctgctggtaaaatacctggcggatttttgaaaagagaagga
agagctactgaacatgaaacactaatttctcgtttaattgatagaccagttagaccattg
tttgctgatggatttaaaaatgatgttcaaatcattaatactgttttatctagtgatcct
acatgtccacctgaaatggttgcattgcttggttcatcactagtacttcaattatctgat
ttaccatttaaaggtccagttagtggtgtaactcttggaatgattaataatgaatttgtt
gttaatccaactgaagaagaaatggaaacaagtatccttgatttaactgttgcaggaaca
actgaagcattaaacatggttgaagcttcagctaaagaagtaagtgaagaattaatgtta
aatgctttaagccatgctcatagcattattaaagaattaaatgaattccaaaatgttatt
tctaaagaattaggtaaagttaaaaaagagtatgatgtatttactttagataaagacatt
gaaaaagaagtattagattatattggtacttcacttgttgatgcagtttcaatatttgac
aaattagaaagatatgcaaaaattgatgaaatcaaagcgaaaactcttgaacactttaaa
gatcgtccattctttaaaataattgataatattagtgtttacgactataaaaaagaaaga
gaattcttaggacatgttgaagccactttaaataaagttgttaaaaatgaagtaagaaga
ttaattacaaaagaaaaaataagacctgatggtagaaaaactgatgaaattagaccactt
gcatcaagagttggtttattagaaagaactcatggatcttcattatttacacgtggacaa
acgcaagccttagctgttgtaactcttggtggacttggtgaaggtaagataattgatgat
attagagatgaagataataaacgttttatgttacattataatttccctcaattcagtgtt
ggtgaaacaggtagatatggtgcaccaggaagaagagaaattggacatggagcattaggt
gaaaaagcgattaaaaatattttacctaatgaagaagaattcccatacactattcgtgtt
gtatcagaaatacttgaatcaaatggatctagtagtcaggcaacaatctgtgctgcaaca
atggcacttatgaatgctggggttccaattaaagcaccagttgctggtattgcaatgggt
cttgtaatggaaggaaaagactatacaattcttactgatattcaaggtatggaagaccat
gaaggcgatatggactttaaagttgctggttcaagagaaggaattacagctcttcaaatg
gatattaagattgatggtataactaatgaaatatttaaagaagccttagaacaagcaaaa
gttgctagattccaattactagatcacatgcattcaacaattgctgaagtttcaagtgaa
ttaagtccttatgctccaaaagttaaattaattaaaattgatcctgaaaaaattagagat
gttattggaactggtggtaaaattattactcaaattatcgaagataataacaatgttaaa
attgatattgaacaagatggtagagtatttattatgcattctgaaacagaagttattaat
cgtgttgctaacattattttaaatatagttagagttcctgaagtaggcaaaatctatgaa
ggaaaagttgttcgtgttgaaaaatttggtgcgtttgttgaattgtgggctggtactgaa
ggattagtacatatttcaaaactttcaaaagaccgtgttaatgaagttactgatgttgta
aatgttggtgatgcaattttagttaaatgtattaaaattgatgaaaaaggtcgagtagat
ttatcaagaaaagatgcattagaagataaataa
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