Croceibacterium atlanticum: WYH_00034
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Entry
WYH_00034 CDS
T03925
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aay
Croceibacterium atlanticum
Brite
KEGG Orthology (KO) [BR:
aay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aay03016
]
WYH_00034 (truB)
Enzymes [BR:
aay01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
WYH_00034 (truB)
Transfer RNA biogenesis [BR:
aay03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
WYH_00034 (truB)
Prokaryotic type
WYH_00034 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AKH41101
UniProt:
A0A0F7KPP1
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All DBs
Position
20683..21663
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AA seq
326 aa
AA seq
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MPDGWLILDKPRALGSTQAVSAVKRVLRKAGYGKVKTGHGGTLDPLAEGVLPIALGEATK
LAGRMLDASKTYAFTIRFGEETDTLDAEGEVVAHSDRRPPMAAISAICETFVGEIEQVPP
AYSALKVDGKRAYDRARAGEEVEMKSRRVTIHSLEVAGGGQRDPVQSAFATTLGRPDPFD
PEPPLELADTVTLVANVSKGTYIRSLARDIAHALGTVGHVTWLRRVKAGPFTESQAISLD
ILEEIGNGARLEDHLLPLEAGLDGIPALTLDPESAQAARQGRILSGMPLSDGHYFAKTGD
VPVALMELSDGTARVVRGFNCQDTAE
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatggttggctcatcctcgacaaaccgcgcgcgcttggttcgacccaggcggtc
agcgccgtgaaacgcgttctgcgcaaggcgggctatggcaaggtgaagaccggccatggc
ggcactctggacccgctggcggagggtgtgctgcctatcgccctgggcgaagcgaccaag
ttggccgggcggatgctggatgccagcaagacctatgccttcaccatccgcttcggcgag
gaaaccgatacgctggatgccgaaggcgaagtggtggcgcacagcgaccggcgcccgcca
atggccgccatttcagcgatctgcgaaacattcgtgggcgagatcgaacaggtgccgccc
gcctattccgcgctgaaagtggatggaaaacgcgcctatgaccgggcgcgggcgggggaa
gaggtggaaatgaagagccgccgcgtcaccatccattcgctggaagtcgccggcgggggg
cagcgcgatccggtgcaatccgccttcgccaccacgcttggccgccccgatcccttcgat
cccgaaccgccgctggaactggccgatacggtgacgctggtggcaaatgtgtccaagggt
acctatatacgttccctggcgcgcgacatcgcccatgcgctgggcactgtcggccatgtg
acgtggctgaggcgtgtaaaggccggacccttcactgaaagtcaggcgatttcgctggac
attctggaggaaatcggtaacggcgcgcggcttgaagatcatcttctgccgctggaggcg
gggctggacggtatcccggcccttaccctcgacccggagagcgcgcaggcggcccgtcag
ggtcggatcctttccggaatgcccctttccgatgggcactatttcgccaagacgggggat
gtgcccgtggcgttgatggaattgtcggatgggacggccagggtcgtcaggggtttcaat
tgtcaggataccgcggagtga
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