Croceibacterium atlanticum: WYH_00036
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Entry
WYH_00036 CDS
T03925
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aay
Croceibacterium atlanticum
Pathway
aay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WYH_00036 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aay03019
]
WYH_00036 (pnp)
03016 Transfer RNA biogenesis [BR:
aay03016
]
WYH_00036 (pnp)
Enzymes [BR:
aay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
WYH_00036 (pnp)
Messenger RNA biogenesis [BR:
aay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
WYH_00036 (pnp)
Transfer RNA biogenesis [BR:
aay03016
]
Prokaryotic type
tRNA degradation factors
WYH_00036 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
S1_2
DUF2152
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
AKH41103
UniProt:
A0A0F7KKI6
LinkDB
All DBs
Position
22183..24471
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AA seq
762 aa
AA seq
DB search
MFDTKTVSLEWGGKTLTLETGRIARQADGAVLATYGETVVLCAVTAAKSVKEGQDFFPLT
VHYQEKFSSAGRIPGGFFKRERGATEKETLTSRLIDRPIRPLFPEGFYNEINVICQVLSY
DGETEADIVAMIAASAALTISGVPFMGPIGACRVGFVDGEYVLNPQQSAALEEGRLDLIV
AATQDAVMMVESEAKELTEEEMLGAVMFAHEESKKVIGAIIDLAEQAAKEPWELDTSDDG
SAMKAEIKGLIGDDIAAAYKLTDKSARSDALNAARAKVKEHYAEADGRTGMTAIKLTKKL
EAEIVRTAILKEGKRIDGRKLDQVRPIESMVGFLPRTHGSALFTRGETQAICTTTLGTKD
SEQMIDGLDGLTYQSFMLHYNFPPYSVGEVGRFGAPGRREIGHGKLAWRALHPVLPSKDD
FPYTIRILSDITESNGSSSMATVCGGCLSMMDAGVPIERPVSGIAMGLILEGDEFAVLSD
ILGDEDHLGDMDFKVAGSEAGITSLQMDIKIAGITKEIMAKALEQAKAGRAHILGEMTKA
LGTARTELSAHAPRIETMQIDKSKIRDVIGTGGKVIREIVAETGAKVDIDDEGVIKISSS
DLSQIEAAKKWIEGIVEEAEVGKIYTGKVVNIVDFGAFVNFMGGKDGLVHVSEMKNERVE
KPTDVVSEGQEVKVKVLEIDNRGKVRLSMRVVDQETGEELEDTRPPREPREPRGDRGDRG
GRGGGDRRGGRGGRGGPRRDRGEGGGKEGGNPDHMPAFLKDD
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacacgaaaaccgtatcgctggagtggggcggaaagaccctcactctggaaacc
gggcgtatcgcccgtcaggccgatggcgccgttctggcgacctatggcgaaaccgtggtg
ctgtgcgccgtcaccgccgcgaagagtgtgaaggaaggccaggatttcttcccgctgacc
gtccactatcaggaaaaattctcctccgccggccgtatcccgggcggcttcttcaagcgt
gagcgcggtgcgaccgaaaaggaaacgctgaccagccgcctgatcgaccgtccgatccgc
ccgcttttccctgaaggtttctataacgaaatcaacgtgatctgccaggtcctgtcctat
gatggcgagactgaggcggatatcgttgcgatgatcgccgcttccgctgcgctgaccatt
tccggcgtgcccttcatggggccgatcggtgcctgccgcgtgggcttcgtcgatggcgaa
tatgtcctcaacccgcagcagtccgccgcgctggaagaaggccggctcgacctgatcgtc
gccgccactcaggatgcggtgatgatggtcgaatccgaagcgaaggaactgaccgaggaa
gagatgctcggcgcggtcatgttcgcgcatgaggaatcgaagaaggtcatcggcgcgatc
atcgatctggctgaacaggccgccaaggaaccgtgggaactcgacacgagcgacgatggc
tccgccatgaaggccgagatcaaggggctgatcggtgacgatatcgccgccgcctacaag
ctgactgacaagtcggcccgttcggacgcgctcaatgccgcccgcgcgaaggtgaaggaa
cattatgccgaggccgacggccggaccggcatgaccgcgatcaagctgaccaagaagctg
gaagccgaaatcgtgcgcaccgccatcctgaaagagggcaagcgtatcgacgggcgcaag
ctggaccaggtccgcccgatagaaagcatggtcggcttcctgccgcgcacccatggttcg
gcactgttcacccgcggtgaaacgcaggcgatctgcaccaccacgctgggcaccaaggac
agcgagcagatgatcgacggcctcgacggcctgacttatcagagcttcatgctgcactat
aacttcccgccctattcggttggcgaagttggccgtttcggcgcccccggccgccgcgag
atcggccatggcaagctggcatggcgtgcgctgcacccggtcctgccgagcaaggatgac
ttcccctacacgatccgcatcctgtccgacatcaccgagtccaacggctcgtcctcgatg
gcgacggtttgcggcggctgcctgtccatgatggatgccggcgtgccgatcgaacgcccg
gtttcgggcatcgcgatgggcctgatcctggaaggcgatgaattcgccgtcctgtccgac
atcctgggtgacgaagatcacctgggcgacatggacttcaaggtcgctggtagcgaagcg
ggcatcaccagcctgcagatggacatcaagatcgccggcatcaccaaggaaatcatggcc
aaggcgctggaacaggccaaggccggccgcgcgcatatcctgggtgagatgaccaaggcg
ctgggcactgcccgcaccgaactgtccgcccatgcgccgcgtattgaaacgatgcagatc
gacaagtcgaagatccgcgacgttatcggcaccggcggcaaggtcatccgcgaaatcgtg
gcggaaaccggcgccaaggtggatattgacgatgagggcgtgatcaagatcagctcttcc
gacctcagccagatcgaagccgcgaagaagtggatcgaaggcatcgtcgaagaagccgaa
gtcggcaagatctacaccggcaaggtggtgaacatcgtcgatttcggcgcgttcgtgaac
ttcatgggtggcaaggacggcctcgtccatgtttccgaaatgaagaacgaacgggtcgag
aagccgaccgatgtcgtgtccgaaggccaggaagtgaaggtcaaggttctggagatcgac
aatcgcggcaaggtccgcctgtcgatgcgcgtcgtggatcaggaaaccggcgaagagctg
gaagatacccgcccgccgcgtgaacctcgcgaaccccgtggggatcgtggtgatcgtggc
ggccgtggcggtggagatcgccgcggtggccgtggcggccgcggtggcccccgtcgcgat
cgcggcgaaggcggcggcaaggaagggggcaatcccgatcacatgccagccttcctgaag
gacgactga
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