Croceibacterium atlanticum: WYH_00803
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Entry
WYH_00803 CDS
T03925
Symbol
rnd_1
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
aay
Croceibacterium atlanticum
Brite
KEGG Orthology (KO) [BR:
aay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aay03016
]
WYH_00803 (rnd_1)
Enzymes [BR:
aay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
WYH_00803 (rnd_1)
Transfer RNA biogenesis [BR:
aay03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
WYH_00803 (rnd_1)
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AKH41856
UniProt:
A0A0F7KRW3
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Position
845810..847024
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AA seq
404 aa
AA seq
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MKIHPLITTTEDLADLCERLAKSEFVAVDTEFMRENTYYPLLCLVQVGNEEEAAAIDPLA
EGIDLSPLLELLTENEDVLKIFHAGGQDVEIIYNLTGKTPHPIFDTQVAMMAISQSEQIG
YANLVESWLGKTIDKGARFTDWSRRPLTDRQIEYAIGDVTYLSTIFPKILKKLIKTGRGM
WLNVEMEKLADPANYANDLDQAWRRIRAPSRSAIVLGRLKALAAWRETEAQGKNIPRGRI
MRDETLADLASHPPKKQEDLAKVRGLSQAWKENDIGKRLMRVMRDAEPLPSEEMPEKPKR
GAPLGKEGALVADLLKLLLKIRAREIDVAARLLTRSDELEALAAGMRNLQVLEGWRYEVF
GRDALELVEGRLAFAVENGKLKMTHINEIEQEAAPEPTEPQIAE
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacacccgctgataacaactaccgaagatttggccgatttatgcgaaaggctc
gcaaaatcggagttcgtcgccgtcgacaccgagttcatgcgcgagaacacctattaccca
ttgctgtgcctggtccaggtcggcaacgaggaggaggccgcggcaatcgacccgctggca
gaagggatcgacctttcgcctcttctcgaattgctgaccgagaatgaggatgtgctgaag
atctttcatgccggcggacaggatgtggaaatcatctacaaccttaccggcaagactccg
caccccattttcgatacgcaggtggcgatgatggccatcagccagagcgagcagatcggc
tatgccaacctcgtcgaaagctggctggggaaaacgatcgacaagggcgcccgctttact
gactggagccgccgcccgctgaccgaccggcagatcgaatatgcgatcggggatgtcacc
tatctttcaacgatatttcccaagatcctgaagaagctgatcaagacaggccgcggcatg
tggctgaatgtggagatggaaaagctcgccgatccggcaaactacgccaatgatctggat
caggcctggcgccggattcgcgccccaagccgcagtgccatcgtgctcggccggctgaag
gcgctggctgcgtggcgcgaaaccgaggcgcagggcaagaacataccgcgcggacgcatc
atgcgcgatgaaacgctggccgatctcgctagccatccgcccaagaagcaggaagatctg
gccaaggtccgcggcctgtcccaggcatggaaggaaaacgacatcggcaagcgattgatg
cgcgttatgcgcgatgccgaaccgctccccagcgaggaaatgccggaaaaaccgaagcgc
ggcgccccgctgggcaaggaaggcgcgctggtggccgatctgctgaaactgctgctgaaa
atccgcgcgcgcgagatcgatgtcgcggcccgcctccttacccgttcggacgagctggaa
gcgcttgccgccggaatgcggaacctgcaggttctggaaggctggcgctacgaggtattc
ggccgcgatgcactggaactggttgaagggcggctggctttcgcggtggagaacggaaag
ctgaaaatgacgcatattaacgagatcgagcaagaagccgctcccgaaccgactgagccg
cagatagccgagtga
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