Croceibacterium atlanticum: WYH_02087
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Entry
WYH_02087 CDS
T03925
Symbol
xthA_1
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
aay
Croceibacterium atlanticum
Pathway
aay03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WYH_02087 (xthA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aay03400
]
WYH_02087 (xthA_1)
Enzymes [BR:
aay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
WYH_02087 (xthA_1)
DNA repair and recombination proteins [BR:
aay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
WYH_02087 (xthA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AKH43121
UniProt:
A0A0F7KVB4
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All DBs
Position
2167688..2168542
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AA seq
284 aa
AA seq
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MCQIFLHCLLRPAKAPKPLRMVSIASWNINSVRLRMPIVADFLRAEAPDVLCLQEIKCQE
PQFPYKAFEELGYSHFAVHGQKGYHGVATVSRIPLKEFSRHDWQDNGEARHVGVELLGPG
KGMVLENVYVPAGGDEPDREVNPKFGQKLDFLERMTRWADRIDRPTMIVGDFNIAPLECD
VWSHKQLLEVVSHTPIEIDTLQRFKDAHGWSDIGREHIAAPQRYYSWWSYRSKDWRKGDR
GRRLDHMWASPDLAAQAISHRVLEDARGWEKPSDHVPLITEFSL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
ttgtgccaaatattcctgcattgcttgctgcgcccggccaaggcacctaagcccctccgc
atggtttcaatcgcttcctggaatatcaattccgttcgcctgcgcatgcccatagtggcc
gatttcctcagggcggaggcacccgacgtgctgtgcctgcaggaaatcaaatgccaggaa
ccgcaattcccctacaaggcttttgaagagctgggatattcccatttcgccgtgcatggg
cagaaaggttatcacggcgtggccacggtcagccggatcccgctgaaggaattttcccgc
catgactggcaggataatggcgaagcgcgccatgtcggtgtcgaactgcttggccccggc
aagggaatggtgctggaaaacgtctatgtcccggctggcggggacgagcccgaccgggag
gtgaacccgaaattcggccagaaactggatttccttgaacgaatgacgcgctgggccgac
aggattgaccggccgaccatgatcgttggcgatttcaatatcgcaccgctggaatgcgac
gtgtggagccacaagcaattgctggaagtagtcagccacacgccgatcgaaatcgacacc
ttgcagcgtttcaaggatgcgcatggctggagcgatatcggccgcgaacatattgccgcg
ccgcaacgctattacagctggtggagctatcgctccaaggactggcgcaagggcgatcgc
gggcgcaggctggaccatatgtgggccagcccggatctggcagcgcaggcgatcagccat
cgcgtgctggaagatgcgcgcggatgggaaaaaccttccgaccacgtcccgctgattacg
gagttttctctctga
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