KEGG   Croceibacterium atlanticum: WYH_02409
Entry
WYH_02409         CDS       T03925                                 
Symbol
cshB
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshB
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
aay  Croceibacterium atlanticum
Brite
KEGG Orthology (KO) [BR:aay00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aay03400]
    WYH_02409 (cshB)
Enzymes [BR:aay01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     WYH_02409 (cshB)
    5.6.2.6  RNA 3'-5' helicase
     WYH_02409 (cshB)
DNA repair and recombination proteins [BR:aay03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    WYH_02409 (cshB)
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 KH_NucS_shadow
Other DBs
NCBI-ProteinID: AKH43439
UniProt: A0A0F7KUY0
LinkDB
Position
2500735..2503104
AA seq 789 aa
MQAAHSAGKHALLVADTGAGKTLAGFLPTLVDFCPSGGVQPGEGLHTLYISPLKALAHDV
QRNLLAPVQEMGLPIRIETRSGDTPSDRRKRQIGKPPDILLTTPESLSLLLSYPDSFQLF
AGLRRVVIDEVHAFATGKRGDLLALALSRLQAIAPDMQRAALSATVASPEAFREWLAPWG
DVDSVTVVEGEKGAPPEVEILLPREERVPWGGHAAIWAIPQLYEEIRRNRTTLVFTNTRF
LAEYIFRNLWDANEDNLPIAIHHGSLSVEARRKVEGAMARGELRALVATASLDLGVDWGD
VDCVVQMGAPKGSSRLLQRIGRANHRLDQPSRAILVPGNRFEFLEATAAKDAVDEGRRDG
EDFRPGGLDVLAQHVMACACAAPFDENALLAEIRASLPYAWIDETIWQRVLNFVATGGYA
LKAYDKFRRITRDTDGFWRLTHPEQAQRHRMNAGIIVDSEMLDVRFRNGRSLGKVEERFA
ASLKPGDTFQFAGLDLEVEQLRDMELVVRASRRGAMIPSYSGLRLPLSTHLADRVQAMLT
DRAGWARFPDDVREWLEVQAWRSHLPAPGRLLVESFPHGGREYTAFYTFTGWNANQSLGM
LITKRMEDRGLMPGGFVANDYSLAVWGLKKVEDPAPLLSPEILNHEFVDWVQDSYLLRRA
FREVAVISGLVERQHPGKRKTGRQVTFSTDLIYDVLRKYEPDHVLIEAAWADARAKMTDI
GRLGDLLDRAVGHIDHVQLDRVSPLAVPVMVMLGRESLPQGSVDDELLLEAETLAGAAMQ
LDPLEDEEE
NT seq 2370 nt   +upstreamnt  +downstreamnt
atgcaggccgcgcacagcgccgggaagcatgcgcttctggtggccgataccggcgcgggc
aagacactggcaggcttcctgccgaccttggttgatttctgcccttccggcggcgtgcag
ccgggcgaggggctgcacacgctttatatctcgccgctcaaggcgctggcgcatgacgtg
cagcgcaatctgctggcgccagtacaggaaatgggcctgcccatccgcatcgaaacgcgc
agcggggataccccgtccgaccggcgcaagcggcagatcggcaaaccacccgacatattg
ctgacaacgccggaaagcctttccttgctgctttcctatccggacagtttccagcttttt
gccggtctccggcgcgttgtgatcgacgaggtgcacgcctttgcgaccggcaagcgcggc
gatctgctggcgctcgccctgtcacgcttgcaggcaatcgcgcccgatatgcagcgcgcg
gccctttccgccacggtggccagcccggaggcatttcgggaatggctggcgccatggggc
gatgtggacagcgtgactgtggtggagggggagaaaggcgccccgcccgaagttgaaatc
cttctgccacgggaagagcgtgtcccatggggcggccatgccgccatctgggcgataccg
cagctttacgaggagatacgccgcaaccggacgacgcttgtctttaccaatacccggttc
ctggccgagtatatcttccgcaatctgtgggatgcgaatgaggataatctgcctatcgcg
atccatcacggatcgttgagcgtggaggcccgccgcaaggtggaaggcgcgatggcgcgg
ggggaattgcgggcgcttgtggctacggccagtctcgatcttggggtggattggggcgat
gtggactgcgtggtgcaaatgggcgcgccaaaaggatccagccgcctgctgcaacgcatc
gggcgcgccaatcaccggctcgatcagcccagccgggcaattctggtccccggcaatcgg
tttgaatttctggaagctactgcggccaaggatgccgtggacgagggccggcgtgacggg
gaggattttcgccccggcgggctggatgtgctggcgcaacatgtgatggcctgtgcctgc
gcggcgccttttgacgagaatgcgctgctggcggaaatccgcgcgagcctgccctatgcc
tggattgatgaaacgatctggcaacgcgtgctcaatttcgtcgccacgggcggttatgcg
ttgaaagcctatgacaagttccgccggatcacgcgcgatacggatggcttctggcgtctg
actcatcccgaacaggcgcagcgccaccgcatgaatgcggggatcatcgtcgattccgaa
atgctggatgtacgtttccgcaacggccgttcgcttggcaaggtggaggaacgtttcgcc
gcctcgctaaagccgggcgatacgttccagtttgccgggctcgatctggaggtcgagcaa
ttgcgcgatatggaactggtggtgcgcgcatcgcggcggggggcgatgatcccgtcctat
agcgggctgcggctgcccttatccacgcatctggcggaccgggttcaggccatgttgacg
gatcgtgcaggctgggcgcggttcccggacgatgtgcgcgaatggctggaggtgcaggcc
tggcgttcccatctgcccgcgccggggcggctgctggtggaaagcttcccccatggcggg
cgggaatatacggctttctacactttcaccggctggaacgcgaaccagtccctggggatg
ctgattaccaagcggatggaagatcgcggcctgatgccggggggctttgtcgccaatgat
tattcgctggcggtctgggggctgaaaaaggttgaggatccggcgccgctgctgtcgccg
gaaatcctcaaccatgaattcgtcgactgggtgcaggattcctatctgctgcgccgcgcc
tttcgcgaagtggcggtgatctccggactggtggagcggcagcatccgggcaagcgcaag
accgggcggcaggtcacgttttcaaccgatctcatctatgatgtgctgcgcaaatatgag
ccggaccatgtgctgatagaagcggcctgggcggatgcacgcgcgaagatgaccgatatc
ggccgcctgggtgatctgctggatcgggcggttggccatatcgatcatgtgcagctggat
cgggtcagcccccttgccgtgccggtcatggtgatgctggggcgggaaagcctgccgcaa
ggatccgtggatgatgaattgctgctcgaagccgaaacgctggccggcgcggcgatgcag
ctcgatccgctggaagatgaggaagagtag

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