Croceibacterium atlanticum: WYH_02635
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Entry
WYH_02635 CDS
T03925
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
aay
Croceibacterium atlanticum
Pathway
aay03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aay00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
WYH_02635 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aay03021
]
WYH_02635 (rpoC)
03400 DNA repair and recombination proteins [BR:
aay03400
]
WYH_02635 (rpoC)
Enzymes [BR:
aay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
WYH_02635 (rpoC)
Transcription machinery [BR:
aay03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
WYH_02635 (rpoC)
DNA repair and recombination proteins [BR:
aay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
WYH_02635 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
RPOC_hybrid
Peptidase_M23
Apocytochr_F_C
YqfD
YnfE
Motif
Other DBs
NCBI-ProteinID:
AKH43665
UniProt:
A0A0F7KXX5
LinkDB
All DBs
Position
2739271..2743593
Genome browser
AA seq
1440 aa
AA seq
DB search
MNELTKFTNQLAKPETFDQIQIEIASPERIRSWSFGEIKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRMKYKGVVCEKCGVEVTVTKVRRERMGHIELAAPVAHIWFLKSL
PSRIGLLLDMQLKQLERVLYFESYIVVEPGLTPLEKFQLLTEDELLDAQDEYGEDAFTAS
IGAEAVKQMLMDLDLEQERDDLLEELATTKSKLKPAKIIKRLKVVESFIDSGNRPEWMIL
EVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIVRNEKRML
QEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTGP
ELKLHQCGLPKKMALELFKPFIYARLDAKGLSMTLKQAKKWVEKERKEVWDILDEVIREH
PVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQLE
ARVLMMSTNNILSPANGKPIIVPSQDMVLGIYYLSMDRQGEPGEGMVLADIAEVHQALHV
GAVTLHSKITSRVPQTDENGKQYMKRVDTTPGRMLIGECLPKSHKVPYEVINRLLTKKDI
GDVIDEVYRHTGQKDTVLFADAIMALGFRHACRAGISFGKDDMIIPDSKEGMIEETKTLV
ADYEQQYQDGFITQQEKYNKVIDAWSRCGDQVANAMMDEIRATPLDENGREAPINSIYMM
SHSGARGSPAQMKQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLAD
TALKTANSGYLTRRLVDVSQDCVIVEEDCKTENALEMRAIVQGGSVIASLGERILGRTTA
EDIINAATGEVIVKAGTLLDEPMVKAIEEAEVQQAKIRSPLVCEAEQGVCGKCYGRDLAR
GTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQVNETSHLESISDGKVIYRDMPTI
TDKRGRRLSLARNGEMVVVDAEGRERAIHRVPYGTMLMFEDGQAVKEGDRLAEWDPFTLP
IITEQSGIVRYQDLAEGKTMEERVDEATGIAQRVVTEYRVGGRSKKEDLRPRMTLLNEAG
DETEAARYMLAPGTTLSVEDGQRVEAGDILARASREAAKTRDITGGLPRVAELFEARIPK
DNAVIAKISGRIEFVRDYKAKRKIAIIPEEGEPVEYLIPKTKVIDVQEGDFVKKGDTLIS
GSPNPHDILEVLGVEALAEYLVNEIQEVYRLQGVKINDKHIEVIVRQMLQKVEITDGGDT
TLLPGEQVDLEEMNQVNAKLGKGKQPATGTPILLGITKASLQTRSFISAASFQETTRVLT
QAAVEGKKDTLIGLKENVIVGRLIPAGTGAGMNRLRVTASSRDAALRAQYKKMQDALVAA
NTAEEERAAELRRDPADDLGDDPLAAVEGETHGTDADAGEYLQQSDETLESPEADNTEEG
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaactgaccaaattcacgaaccagctcgccaagccggaaaccttcgaccagatc
cagatcgagatcgcgagcccggagcgtatccgcagctggtccttcggcgagatcaagaag
ccggaaacgatcaactatcgcacgttcaagcccgaacgtgacggcctgttctgcgcgcgc
atcttcggtccggttaaggattacgaatgcctgtgcggcaagtacaagcgcatgaaatac
aagggcgtcgtctgcgaaaagtgcggcgtcgaagtgacggtgaccaaggtccgccgcgaa
cgcatgggccatatcgaactggccgcaccggtcgcgcatatctggttcctgaagtcgctg
ccgagccgcatcggcctgctgctcgacatgcagctgaagcagctggagcgcgtgctctat
ttcgagagctacatcgtggtcgagccgggcctgaccccgctcgaaaagttccagctcctg
accgaggacgaactgctcgacgctcaggatgaatatggcgaggatgccttcaccgcgagc
attggcgccgaagccgtcaagcagatgctgatggacctggacctggaacaggaacgcgac
gatcttctcgaagaactcgccaccaccaagtccaagctgaagcccgccaagatcatcaag
cggctcaaggtcgtggaaagcttcatcgattccggcaaccgcccggaatggatgatcctg
gaagtcgtgccggtcattccgccggaactgcgcccgctggttccgctggatggcggccgt
ttcgcgacgtccgacctcaacgacctctatcgccgcgtcatcaaccgcaacaatcgcctg
aagcgcctgatggaactgcgcgcgccggacatcatcgtccgtaacgaaaagcgcatgttg
caggaggcagtggacgcgctgttcgacaatggccgccgcggccgtgtcatcaccggcgcc
aacaagcgtccgctgaagtcgctgtccgacatgctcaagggcaagcagggccgcttccgc
cagaaccttctgggcaagcgcgtcgactattcgggccgttcggtcatcgtgaccggtccg
gaactcaagctgcaccagtgcggcctgcccaagaagatggcgctcgagctgttcaagccg
ttcatctacgcccgcctcgacgccaagggtctttccatgaccctgaagcaggcgaaaaag
tgggtcgagaaagagcgcaaggaagtctgggacatcctcgacgaagtcattcgcgagcac
ccggttctgctgaaccgcgccccgacgcttcaccgcctcggcattcaggctttcgagccg
gtgctgatcgagggcaaggcgattcagcttcacccgctggtctgttctgccttcaatgcc
gacttcgacggtgaccagatggccgtccacgttccgctgagcctcgaggcgcagctggaa
gcgcgcgtgctgatgatgtccaccaacaacatcctgtcacccgcgaacggcaagccgatc
atcgttccttcgcaggacatggtgctgggcatctattacctgtccatggatcgccagggc
gaaccgggcgaaggcatggtgctggccgatattgccgaggttcaccaagcgttgcatgtc
ggggcggttaccctgcactccaagatcaccagccgcgtcccgcagaccgacgaaaacggc
aagcagtacatgaagcgcgtggacaccacgccgggccggatgctgatcggcgaatgcctg
ccgaagagccacaaggtcccttacgaggtcatcaaccgcctgctgacgaagaaggacatc
ggcgacgttatcgacgaggtctatcgtcacaccggccagaaggacacggtgttgtttgcc
gacgccatcatggcactgggcttccgccacgcctgccgtgcgggtatttccttcggcaag
gacgacatgatcattccggattccaaggaaggaatgatcgaggaaaccaagaccctggtc
gccgattacgagcagcagtaccaggacggcttcatcacccagcaggaaaagtacaacaag
gtgatcgacgcctggagccgttgcggcgaccaggtggcgaacgccatgatggacgagatc
cgggcaactccgctggacgagaatgggcgtgaagcgccgatcaactcgatctacatgatg
agccattccggtgcgcgtggttcgccggcgcagatgaagcagcttgccggtatgcgcggc
ctcatggccaagccgtcgggcgagatcatcgaaacgccgatcatctcgaacttcaaggaa
ggcctgaccgtccttgaatacttcaactccacccacggcgcccgtaagggtctggccgat
acggcgctcaagacggcgaactcgggttacctgacccgccgtctggtcgacgtgtcgcag
gactgcgtcatcgtggaagaggactgcaagaccgagaacgcgctggaaatgcgtgcgatc
gttcagggcggcagtgtcatcgcttcgctcggcgaacgtatccttggccgcaccacggca
gaggatatcatcaacgctgccacgggcgaggtgatcgtgaaggccggcacgctgctggac
gaaccgatggtcaaggccatcgaggaagccgaagtgcagcaggccaagatccgcagcccg
ctggtctgcgaagcggaacagggtgtctgcggcaagtgctacggacgcgatctggcccgc
ggtacgccggtgaatatcggtgaggcggtcggcgttatcgccgcccagtccatcggtgaa
ccgggcacgcagctgaccatgcgtaccttccacatcggcggtgccgcccaggtgaacgaa
accagccacctggaaagcatcagcgacggcaaggtcatctatcgcgacatgccgaccatc
accgacaagaggggccgccgcctctctctcgcccgcaatggcgagatggtggttgtcgac
gctgaaggccgtgaacgcgcgatccaccgcgtgccctacggcacgatgctgatgttcgag
gatggacaggccgtgaaggaaggcgatcgcctggccgagtgggacccgttcaccctgccg
atcatcaccgagcagtcgggtatcgtgcgctaccaggatctcgccgaaggcaagaccatg
gaagagcgtgtggacgaagccaccggcatcgcccagcgcgtcgtgaccgaatatcgcgtc
ggcggccgttccaagaaggaggatctgcgtccgcgcatgaccctgctgaacgaagccggg
gacgagacggaggccgcgcgctacatgctggcgccgggcactacgctttcggtcgaggat
ggccagcgggtcgaggccggtgacattctggcgcgtgccagccgtgaagccgccaagacg
cgcgacatcaccggcggtctgccgcgagtggcggaactgttcgaagcccgcatcccgaag
gataacgcggtcatcgcgaagatttcgggccggatcgaattcgttcgcgactacaaggcg
aagcgcaagatcgcgatcatcccggaagagggcgaaccggttgaatacctgatccccaag
accaaggtgatcgacgtccaggaaggcgacttcgtgaagaagggtgacacgctcatttcg
ggcagtcccaatccgcacgatatcctggaagttctcggggtcgaggcgctggccgaatat
ctcgtgaacgagattcaggaagtctatcgactgcagggcgtgaagatcaacgacaagcac
atcgaggtgatcgttcgccagatgctgcagaaggtcgagatcaccgatggcggcgatacc
acgctgctgccgggcgaacaggtcgatctggaagagatgaaccaggtgaatgcgaagctg
ggcaagggtaagcagcctgccaccggcacgccgatcctgctgggcatcaccaaggccagc
ctgcagacgcgcagcttcatttcggcggcttccttccaggaaaccacgcgcgtgctcacc
caggctgccgtcgaaggcaagaaggacacgctgatcggtctcaaggaaaacgtgatcgtg
ggccgtctcatccccgccggtaccggcgcgggcatgaaccgtctgcgcgttacggcttcc
agccgcgatgctgccctgcgcgcccagtacaagaagatgcaggatgctcttgtcgctgcc
aatacggcagaggaagagcgtgccgccgaattgcggcgcgatccggctgacgatctgggc
gacgatccgctggccgctgtcgagggggaaacccacggcacggatgcggatgccggcgag
tatctgcagcagagtgacgagacgctggaaagccccgaagcggataataccgaagagggt
tga
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integrated database retrieval system
