Anoxybacillus ayderensis: B379_07530
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Entry
B379_07530 CDS
T10145
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
aayd Anoxybacillus ayderensis
Pathway
aayd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aayd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B379_07530 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aayd03021
]
B379_07530 (rho)
03019 Messenger RNA biogenesis [BR:
aayd03019
]
B379_07530 (rho)
Transcription machinery [BR:
aayd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
B379_07530 (rho)
Messenger RNA biogenesis [BR:
aayd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B379_07530 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_22
AAA
NACHT
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AXM89007
LinkDB
All DBs
Position
1416770..1418056
Genome browser
AA seq
428 aa
AA seq
DB search
MELGDLTIATLENMTIKELYELARQYKISYYSKLTKKELIFAILKARAEQDGLFFMEGVL
EIIQSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYFGLLHV
EAVNGEDPEIAKERVHFPALTPLYPNRQMKLETTPDKLSTRLIDLIAPIGFGQRGLIVAP
PKAGKTMLLKEIANSITTNHPDVELIVLLIDERPEEVTDIERSVSADVVSSTFDEVPENH
IKVAELVLERAMRLVEHKRDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKR
FFGAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAEKRIFPAID
IRRSGTRKEELLIPKEHLEKLWAIRKTMSDTPDFIERFIHRLKQTKTNEEFFAMLDEEWK
AAGNLKRL
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggagttaggagatttaacgattgcaacgctagaaaatatgaccattaaagagctatat
gaattagctcgtcaatacaaaatttcatattacagtaaactgacaaagaaagaattgatt
tttgccattttaaaagcgcgcgctgaacaagacggcctctttttcatggaaggcgtgctt
gaaattattcaatcagaaggatttggctttttgcgtccaattaactattcccctagttcg
gaagatatttatatttccgcatcgcaaattcgtcgctttgatttgcgcaacggtgataaa
gtatcaggaaaagtgcgcccgccaaaagaaaatgaacggtatttcggcttgctgcacgtc
gaggcagtaaacggtgaagacccagaaattgcgaaagaacgcgttcacttcccggcgcta
acaccgctttatccgaaccgacaaatgaagctagagacgacaccagacaagctatctact
cgcctcattgatttgattgctccgatcggatttggccagcgcggtttaattgtcgcgcct
ccgaaagcgggaaaaacgatgttgttaaaagaaattgccaacagcattacaacaaatcac
ccagatgttgaactcatcgttttgcttattgatgagcgtccagaagaagtgacggatatt
gaacgttctgtatcggcggatgtcgtcagctcgacgtttgatgaagtgccagaaaaccat
attaaagtggcggagcttgtgcttgaacgtgcgatgcgcctcgttgaacataagcgtgat
gtcgttatcttaatggatagtattacgcgtttagcgcgcgcatacaacttagtcattcct
ccaagcggacgcacgttatcgggaggaattgacccggccgcattccaccgtccgaaacgg
ttttttggagcggcgcgaaacatcgaagaagggggcagcttaacgattttagcgactgct
cttgtcgatacaggttcgcgcatggacgatgtcatttacgaagaatttaaaggaacagga
aatatggagcttcatctcgatcgctcattagcggaaaaacgaattttccctgccatcgac
attcgtcgttcgggcacgcgaaaagaagaattattaattccaaaagaacatttagaaaaa
ttgtgggccattcgtaaaacgatgtcagatacgccagactttattgagcgatttattcat
cgattaaagcaaacgaaaacgaacgaagagttttttgcgatgttagatgaagagtggaaa
gcagccggaaatttaaaacggttataa
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