Anoxybacillus ayderensis: B379_13175
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Entry
B379_13175 CDS
T10145
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aayd Anoxybacillus ayderensis
Pathway
aayd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aayd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B379_13175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aayd03019
]
B379_13175
03400 DNA repair and recombination proteins [BR:
aayd03400
]
B379_13175
Enzymes [BR:
aayd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B379_13175
Messenger RNA biogenesis [BR:
aayd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B379_13175
DNA repair and recombination proteins [BR:
aayd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B379_13175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
AXM90025
LinkDB
All DBs
Position
2455700..2457142
Genome browser
AA seq
480 aa
AA seq
DB search
MINILKERFGYDSFRIGQKEIIEDVLHGRNCVAMLPTGGGKSLCYQLPGYILDGSVLIIS
PLVSLMEDQVQQLKNRVEKRVVALNRFLSYREKKDVLHELASYRFIYASPEILQSPLLIE
ALTRINISLFVVDEAHCISQWGHDFRPDFLKLGLLRETLGNPPCLALTATATRQVIDDIV
ATLKLDRVKQHMYPLDRTNICLYVQYVHTLEEKMEALKQLIAILPKPGIVYVSSRQWAET
LANMLHGDHRVGYYHGGMDGEQRLLIQQQFVYDQLDVICCTNAFGMGVDKPNVRFVIHFH
LPTQPEAYWQEIGRAGRDGNESIAILLYAPGDEQLGQAMIDAEFPTKEQIVYALDALRHG
QKETGLTDVQQRLLLYWLEQMNVQEDVNILAKQLYAHIEQRKKEKMNKWIFMQRWVHEQT
CRRRAMLSYFEQQPLPNERCCDRCGAHIYVNAPVKHMKQIQLRPWHEELRAMFSIKVENK
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgattaacatattaaaggagcgatttggctacgattcgtttcgcatcggacagaaagaa
attattgaagatgtgcttcatggacgaaattgtgtcgctatgctcccgaccggtgggggg
aagtcgctttgttatcagcttcctggctacatattggacggtagtgtgctaattatttca
ccgctcgtctctctcatggaagatcaagtacaacagcttaaaaatcgcgttgaaaaacgt
gttgtcgcactgaatcgttttctttcctatcgcgaaaaaaaagacgtgctacatgaatta
gcatcgtaccgttttatttacgcttcacctgaaattttacaatctcccttgctcattgaa
gcgctaacgcgcataaacatttcgttgtttgttgtagatgaagcgcattgcatttcacaa
tggggacacgattttcgtcctgattttttaaagctcggtcttcttcgtgaaacgctcggc
aacccgccttgtttagcgctaacagcaacggcaactcgtcaagtgattgatgatattgtc
gcaacgcttaaacttgatcgagtgaaacagcatatgtacccacttgatcgaacgaacatt
tgcttatatgttcaatacgttcatacgttagaagagaaaatggaagcgttaaaacaactg
atcgctatattgcctaagccaggcatcgtttatgtatcgagtcggcaatgggcagaaacg
ttagcaaacatgttacatggagatcatcgtgttggttactatcatggaggcatggatggc
gaacagcgacttcttattcaacaacagtttgtttatgatcagttagacgtcatttgttgt
acgaatgcgtttggaatgggtgttgataaaccaaacgttcgcttcgttattcattttcat
ttgccgacgcaaccggaagcatattggcaagaaattggacgcgccgggcgagatggaaac
gaaagcatagcgatattattgtatgcgccaggagacgagcaactcggacaagcgatgatc
gatgcggaatttccgacaaaagagcaaatcgtttatgcgctggacgctttacgtcatgga
cagaaagagacgggattaacagatgtacaacaacggcttcttttatattggttagaacaa
atgaatgttcaagaagatgtgaacatattagcaaaacaactgtatgcccatatcgagcaa
agaaaaaaagaaaaaatgaacaaatggatatttatgcaacgatgggtacacgaacaaact
tgtcgccggcgtgcgatgctttcatattttgaacaacaaccacttccgaatgaacgttgt
tgtgaccgatgtggcgcccatatatacgtaaatgcccctgtaaaacatatgaaacaaata
cagttacgtccatggcatgaagagcttcgggcgatgttttcgataaaggtggaaaacaaa
tga
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