Aggregatibacter aphrophilus W10433: ADJ80_01810
Help
Entry
ADJ80_01810 CDS
T04521
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
aaz
Aggregatibacter aphrophilus W10433
Pathway
aaz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aaz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ADJ80_01810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aaz03021
]
ADJ80_01810
03400 DNA repair and recombination proteins [BR:
aaz03400
]
ADJ80_01810
Enzymes [BR:
aaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ADJ80_01810
Transcription machinery [BR:
aaz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ADJ80_01810
DNA repair and recombination proteins [BR:
aaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ADJ80_01810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AKU62581
LinkDB
All DBs
Position
complement(362421..366689)
Genome browser
AA seq
1422 aa
AA seq
DB search
MKDLVKFLKAQSKTAEDFDVIKIGLASPDMIRSWSYGEVKKPETINYRTFKPERDGLFCA
RIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPVAHIWFLKS
LPSRIGLLLDMPLRDIERVLYFESYIVIEPGMTDLERGQLLTEEQYLDAEDRWQDEFDAK
MGAEAIQALLRGIDLEAECENLREELQETNSETKRKKITKRLKLLEAFLQSGNKPEWMVM
TVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLIAPDIIVRNEKRML
QESVDALLDNGRRGRAITGSNRRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGP
YLHLHQCGLPKKMALELFRPFIYAKLESRGYATTIKAAKKMVEREDAIVWDILAEVIREH
PILLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLTLEAQLE
ARALMMSTNNILSPANGDPIIVPSQDVVLGLYYMTREKVNGKGEGMLLQDPREAEKAYRT
GQAELHSRVKVRITEYVKNDTGEFEPKTTLTDTTIGRAILWMIAPKGMPFSLFNQTLGKK
AISKLINESYRRLGLKASVMFADHIMYTGFAYAARSGSSVGIDDMVIPAKKYEIISAAEE
EVAEIQEQFQSGLVTAGERYNKVIDIWAAANERVAKAMMENLSTEEVINREGKPEKQASF
NSIFMMADSGARGSAAQIRQLAGMRGLMARPDGSIIETPITANFREGLNVLQYFISTHGA
RKGLADTALKTANSGYLTRRLVDVAQDLVIVEDDCGTHEGIVMTPLIEGGDEKVPLREQV
LGRVVAEDILKPGTEEVLIPRNTLLDEKLCDVLDENSVDSVKVRSVVTCNTDFGVCAKCY
GRDLARGHLINQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASAAAKESSVQVKNNGTLR
LANAKFVTNNEGKLVLTSRNTELTVVDTFGRTKEHYKVPYGAILNKGDQQEVNAGETIAN
WDPHTMPVISEVAGFVKFVDIVDGLTVTRQTDELTGLSSIVVQDVGERATAGKDLRPAIK
LVDDKGNDIVVPGTDVVAQYFLPSKAIVTLDDGAEVHIGDPLARIPQESVGTKDITGGLP
RVADLFEARKPKEPAILAEISGIVSFGKETKGKRRLLITPAEGEVYEEMIPKWRQLNVFE
GEMVERGDLISDGAETPHDILRLRGVHAVTEYIVNEVQEVYRLQGVKINDKHIEVIVRQM
LRKAIVTKAYDSEFLEGEQVEVARVKIVNRKREAEGKPPVEYERELLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGFAYHQNRHKNPTVISEEE
VPVRLSAADEEEIASEFVMTSDEASANLAEMLNMVEDDDHAE
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttagttaagtttttaaaagcacaatcaaaaaccgctgaagattttgatgtg
attaaaatcggtttagcctcacctgacatgatccgttcttggtcatacggtgaagttaaa
aagcctgaaacaatcaactatcgtacctttaaaccggaacgtgacggtcttttctgtgcc
cgtatcttcggaccggtaaaagattacgaatgtttgtgtggtaagtacaaacgcttaaaa
caccgtggtgtgatttgtgaaaaatgtggcgttgaagtcactcaaactaaagttcgtcgt
gaacgtatggggcatatcgaattagcttcaccggtggcgcacatttggttcttaaaatcc
ctgccgtcccgtatcggtttattgttagatatgccgttgcgtgatattgaacgcgtgctt
tattttgaatcttatattgtgatcgaaccgggtatgactgatcttgagcgcggtcagttg
ttaaccgaagaacaatatcttgacgcggaagaccgttggcaagatgagttcgatgccaaa
atgggtgcggaagccattcaagccttattgcgcggtatcgatttggaagcggaatgcgaa
aatttacgtgaagaattacaagaaaccaattccgaaaccaaacgtaagaaaatcactaaa
cgcttaaaattattggaagccttcttacaatccggcaacaaaccggaatggatggtgatg
accgtattaccggtgcttccaccggatttacgtccgttagtgccgttagacggcggtcgt
tttgcgacttccgacttgaacgatttataccgtcgcgtaatcaaccgtaacaaccgttta
aaacgtttattggatttaattgcaccggatattatcgtgcgtaacgaaaaacgtatgtta
caagaatccgtcgatgcgttgttagataacggtcgtcgcggtcgtgctatcaccggttct
aaccgtcgtccgttaaaatcattagcggatatgattaaaggtaaacaaggtcgtttccgt
caaaacttgttgggtaaacgtgttgactactccggtcgctccgtaattactgtaggtcca
tacttacacttacaccaatgtggtttgccgaagaaaatggcattggaattattccgtccg
tttatctatgcaaaattagaaagccgtggttatgcgacaacgattaaagcagcgaagaaa
atggtggagcgtgaagatgcgatcgtttgggatatcttggctgaagtcattcgcgaacat
ccgattctgttgaaccgtgcgccaacattgcaccgtttgggtattcaagcgtttgaacct
atcttaatcgaaggtaaagcgattcaattacacccacttgtttgtgcagcgttcaacgcg
gacttcgacggtgaccaaatggcggtacatgtaccgttaacgttggaggcacaattagaa
gcacgtgcgttaatgatgtctacgaacaacattctttctccggcaaacggtgatccgatt
atcgttccgtcacaagacgtagtgttagggctttactacatgacccgcgaaaaagtgaac
ggtaaaggtgaaggcatgctattgcaagatccgcgcgaagcggaaaaagcctatcgtacc
ggtcaggcggaattgcattcccgcgtaaaagtgcgtattaccgagtatgtgaaaaacgat
accggtgagtttgaaccgaaaactacgttaaccgacaccactatcggtcgtgctattttg
tggatgatcgcgccgaaaggcatgccgtttagcttgtttaaccaaactcttggcaaaaaa
gccatttctaagttaattaacgaaagctatcgtcgtttaggcttgaaagccagtgtcatg
tttgctgaccacattatgtataccggttttgcttatgctgcacgttccggttcttccgtt
ggtatcgacgatatggtcattccggcgaaaaaatacgaaattatttctgcagcggaagaa
gaagttgctgaaattcaggaacaattccaatccggtcttgtgactgccggcgaacgttat
aacaaagtaatcgatatttgggctgctgccaacgagcgtgttgctaaagccatgatggaa
aacctttctacggaagaagtgattaaccgtgaaggtaaaccggaaaaacaagcgtctttc
aacagcatctttatgatggcagattccggtgcgcgtggttctgcagcacagattcgtcag
ttagcaggtatgcgtggcttgatggcacgtccggatggttccattatcgaaacacctatt
accgcaaacttccgtgaaggtttaaacgttttacaatactttatttccacccacggtgcg
cgtaaaggtttggcggataccgcgttgaaaacagcgaactcaggttacttaactcgtcgt
ttggttgacgtagcgcaagacctcgttatcgtagaagatgactgtggtacacacgaaggt
atcgtgatgactccgttaatcgagggtggtgatgaaaaagtgcctctacgtgaacaagtt
ttaggtcgtgtagtcgctgaagacatcttaaaaccaggtacggaagaagttttaattcca
cgcaataccttattagatgaaaaattgtgtgacgtattagatgaaaactctgtagacagc
gtgaaagtacgttctgttgtaacctgtaacaccgatttcggagtgtgtgcgaaatgttac
ggtcgtgacttagcacgtggccacttgatcaaccaaggtgaagcagtgggtgttattgcg
gcacaatctatcggcgaaccgggaacacagttaaccatgcgtacgttccacatcggtggt
gcggcatctgcagcagccaaagagtctagtgtacaagtgaaaaacaacggtacattgcgt
ttagctaatgcgaaattcgttaccaataacgaaggtaaattggtattaacttctcgtaac
acggaattaaccgttgtggatacgttcggacgtaccaaagaacactataaagtgccttat
ggtgcgattttaaacaaaggcgatcagcaagaggtgaatgccggtgaaaccatcgctaac
tgggatccgcatactatgccggttatctctgaagtggctggttttgtgaaattcgtggat
atcgtggatggcttaaccgttacccgtcaaaccgacgaattaaccggtctttcttctatc
gtggtgcaagacgtgggtgaacgtgcaacagcaggtaaagacttacgtccggcgattaaa
ctggttgatgacaaaggtaacgatattgtcgttccgggtaccgatgttgtagcgcaatac
ttcttaccaagtaaagctatcgtgactctagatgacggcgcagaagtgcatatcggtgat
ccgttagcacgtattccgcaagaatccgtgggaacgaaagatattaccggtggtcttcct
cgcgtggcagacttgtttgaagcgcgtaaaccgaaagagcctgcgatcttagcggaaatc
tccggtatcgtgtctttcggtaaagaaaccaaaggtaaacgtcgcttgttgattactccg
gcagaaggcgaagtatacgaagaaatgattccaaaatggcgtcaattgaacgtattcgaa
ggtgaaatggtagaacgcggtgatttaatctccgacggtgcggaaacgccacatgacatc
ttacgtttacgtggtgtacacgcagtaaccgaatatatcgttaatgaagtccaagaagtt
taccgcttacaaggggtaaaaattaacgataaacatattgaagttatcgtacgccaaatg
ttgcgtaaagcgattgtaactaaagcttatgactccgaattccttgaaggggaacaagtg
gaagtggctcgcgtgaaaatcgttaaccgtaaacgtgaagcggaaggcaagccaccggtg
gaatatgaacgtgaattattgggtattaccaaagcgtccttggccaccgagtccttcatc
tctgcggcatccttccaagaaaccacacgtgtgttaacggaagcggcagtagcaggtaaa
cgcgatgaattacgcggcttgaaagaaaacgtcattgtgggtcgtttgatcccggcaggt
accggttttgcgtatcaccaaaatcgtcataaaaatccaaccgtgatttccgaagaagag
gtgccggtaagattatcggcagcggatgaagaagagattgcttccgaattcgtcatgact
tctgatgaagcatcggcaaatttggctgaaatgctgaatatggtagaagacgacgatcac
gcagaataa
DBGET
integrated database retrieval system
