Aggregatibacter aphrophilus W10433: ADJ80_01880
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Entry
ADJ80_01880 CDS
T04521
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
aaz
Aggregatibacter aphrophilus W10433
Brite
KEGG Orthology (KO) [BR:
aaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aaz03009
]
ADJ80_01880
Enzymes [BR:
aaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ADJ80_01880
Ribosome biogenesis [BR:
aaz03009
]
Prokaryotic type
rRNA helicases
ADJ80_01880
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Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrA_inter
Cas3-like_C_2
WSD
Motif
Other DBs
NCBI-ProteinID:
AKU62595
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Position
complement(383258..384586)
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AA seq
442 aa
AA seq
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MTNLTQFADFDLAPELLNAIQKKGYQRPTAIQQETLPAAMDGEDVLGSAPTGTGKTAAFL
LPAIQHLLDYPRRKPGAPRVLILTPTRELAMQVAEQAEELACFTKLSIATITGGVAYQNH
GEIFNKNQDIVVATPGRLLQYIKEENFDCRAVEILIFDEADRMLQMGFGQDAEKISAETR
WRKQTLLFSATLEGDLLEDFADRTLNEPVKIDAEPSRRERKKIQQWYYHADSNEHKFKLL
ARFIEQEQVSKGIVFVRRREDVRELAENLRKRGIRSTYLEGEMAQTQRNNAIDKLKNGVV
TVLVSTDVSARGIDIDDVSHIMNFDLPYSADTYLHRIGRTARAGKKGTAVSFVEAHDYRL
LGKIKRYTQEILKARVIEGLEPRTKAPKDGEIKTVSKKQKAKKLEKREAQKKTDKKAKQR
HQDRKNIGKRRKPSASTTETAQ
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacctcactcaatttgccgattttgatctcgcgcccgaattactcaacgccatt
cagaaaaaaggttatcaacgcccaactgctattcagcaagaaactctcccggccgccatg
gatggagaggatgtattaggctcggcaccaacaggtacgggaaaaaccgccgcgtttttg
ctaccggcgattcaacatttgttggattatccgcgccgtaaaccgggcgcgccgcgtgtg
ttgattctcacgccaacccgtgagcttgccatgcaggtagcggagcaggcggaagaactg
gcttgcttcactaaactcagcattgcgactatcaccggtggtgtggcgtatcaaaatcac
ggcgagattttcaataaaaatcaggacattgtggtggcgaccccggggcgtttgttgcaa
tacattaaagaagaaaattttgattgccgtgcggtagaaattctgatttttgacgaagcg
gacagaatgttgcaaatgggctttgggcaagatgcagagaaaatctcggcagaaacccgt
tggcgtaagcaaacgttgttgttctcggcgacccttgaaggggatttattggaagatttt
gccgaccgcacgttaaacgagccggtaaaaattgatgcagagcctagccgccgtgagcgg
aagaaaattcagcagtggtattatcacgccgacagcaatgagcataaattcaaattattg
gcgcgtttcattgagcaagagcaagtaagtaagggcattgtattcgtacgccgtcgagaa
gatgtgcgcgaactggcggaaaatctacgcaaacgcggtattcgcagcacgtatttggaa
ggcgaaatggcgcaaacccaacgcaacaacgctatcgataaactaaaaaacggcgtggta
acggtgttggtctccacggatgtctccgcacgcggtatcgatattgatgacgtcagccac
attatgaattttgatttgccgtacagcgccgatacttatttgcaccgcatcgggcgtacc
gcgcgcgccggcaaaaaaggcaccgccgtgtctttcgtggaagcgcacgattatcgtctg
ctgggcaaaattaagcgttatacccaagaaattctgaaagcccgtgtgattgaaggtttg
gaaccgcgcaccaaagcgccgaaagacggcgaaatcaaaaccgtcagcaaaaaacaaaaa
gcgaaaaaattagaaaaacgcgaagcgcaaaagaaaacggataaaaaagccaaacaacgt
catcaggatcgtaaaaatatcggtaaacgccgtaaaccaagtgcttcaacaacagaaacc
gcccaataa
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