Aggregatibacter aphrophilus W10433: ADJ80_02790
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Entry
ADJ80_02790 CDS
T04521
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aaz
Aggregatibacter aphrophilus W10433
Pathway
aaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ADJ80_02790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaz03019
]
ADJ80_02790
03400 DNA repair and recombination proteins [BR:
aaz03400
]
ADJ80_02790
Enzymes [BR:
aaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ADJ80_02790
Messenger RNA biogenesis [BR:
aaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ADJ80_02790
DNA repair and recombination proteins [BR:
aaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ADJ80_02790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Hanta_Gn-B
HEM4
Motif
Other DBs
NCBI-ProteinID:
AKU62758
LinkDB
All DBs
Position
568496..570388
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AA seq
630 aa
AA seq
DB search
MSVSAPSSSLQQSAVDFSDKSPENLTALSSTALDVLHSVFGYQSFRKGQQEIIHAALSGQ
DCLVIMATGTGKSLCYQIPALCFDGMTLVVSPLISLMKDQVDQLRTNGIEADYLNSTQTF
EEQQQVQNRAISGQLKLLYLSPEKVMTNSFFQFISHCNVSFIAIDEAHCISQWGHDFRPE
YTQLGGLKGCFPKVPIMALTATADQTTQQDILQNLRLNRPHFHVGSFDRPNIRYTLVEKF
KPMEQLCRFVLAQKGKSGIVYCNSRNKVERIAETLCNKGVRAAAYHAGMENTLREKVQRD
FQRDNIQVVVATIAFGMGINKSNVRFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYD
PADYVWLNKMLMEKPETPQRQIEQHKLQAIGEFAESQTCRRLVLLNYFGEHRQIPCQNCD
ICLDPPKKYDGLLDAQKIMSAIYRTGQCYGAHYVIAVLRGMNNQKIRDQQHDQLSVYGIG
KEHSTEYWQSVLRQLIHLGLVRQIIGEYGNTLQLTENAKPILRGETPLELATPRLSSIVT
TAMTQKSAVSFYDKDLFARLRFLRKQIADKENIPPYIVFNDATLQEMAQYQPVSNIEMLQ
INGVGSIKLERFGQPFMALIREHKNARKAE
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtttcagccccatcttcatcccttcaacaaagtgcggtggatttttccgataaa
tcgccggaaaatctcaccgcactttcttccaccgcattggatgttttacattccgttttc
ggttatcaatctttccgcaaaggtcaacaagagattattcatgcagccctaagcggacag
gattgtttggtgattatggccaccggcacgggcaaatcgctgtgttatcaaatccctgcg
ttgtgttttgacggcatgacgttagtggtttcgccgttgatttctttaatgaaagaccag
gtggatcagcttcgcaccaatggcattgaagcggattatcttaactccacacaaactttt
gaagaacagcaacaggtgcaaaatagggcgatttccgggcaactaaaattattgtatttg
tcgccggaaaaagtcatgacgaacagctttttccaatttatttctcattgcaacgtcagc
tttattgctatcgacgaggcacattgcatttcccaatggggccatgattttcgtcctgaa
tatacccaactgggcgggctaaaaggttgtttcccaaaggtgccaattatggcgcttacc
gccacggcagatcagacaacgcaacaagatattctgcaaaatctccggctaaatcgaccg
cactttcatgtgggcagttttgatcgcccgaatattcgctacaccttagtggaaaaattt
aagccaatggaacagctttgtcgtttcgtgctcgcccaaaaaggcaaaagcggtattgtt
tactgcaacagccgcaataaggtggaacgcattgcggaaacgctgtgtaacaaaggtgtg
cgggcggcggcgtatcatgcgggcatggaaaataccttgcgggaaaaggtacaacgggat
tttcagcgggataacattcaagtggtggtggcgactatcgccttcggcatggggattaat
aaatccaacgtgcgctttgtggcgcattttgatttgccgcgtagcattgaatcctactat
caagaaaccggccgtgcagggcgtgacgatttgccggcagaagcggtgttattttacgat
ccggcggattatgtgtggttgaacaaaatgctcatggaaaagccggaaacgccacaacgt
caaatcgaacagcataaattgcaagccatcggcgaatttgccgagagtcaaacctgtcgc
cgtttggtcttattgaattatttcggcgaacatcgccaaataccctgccaaaattgtgat
atttgtctcgatccgccgaaaaaatatgacggtttactggacgcacaaaaaatcatgtcg
gcgatttatcgcaccggccaatgttatggcgcccattatgtcattgccgtattgcgcggc
atgaataaccagaagattcgcgatcagcagcacgatcagcttagcgtgtacggtatcggc
aaagaacacagcacggaatattggcagtcagtattacgtcagttaattcacttgggcttg
gtgcgtcaaattatcggcgaatacggtaacactttgcagttgacggaaaatgctaagccg
attttgcgtggcgaaaccccgttggaattggcaacaccacgcttgtcttccattgtcact
accgcgatgacacagaaaagtgcggtcagtttttacgataaagatctgtttgcccgtctg
cgttttttacgcaaacaaattgccgacaaagaaaacattccgccgtatatcgtatttaat
gatgcgaccttgcaggaaatggcgcagtatcaacccgtcagtaacattgaaatgttgcaa
attaacggtgtgggaagcattaaactggaacgttttggtcaaccctttatggcattaatt
cgtgaacacaaaaatgcccgtaaagcagaatga
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