Aggregatibacter aphrophilus W10433: ADJ80_03635
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Entry
ADJ80_03635 CDS
T04521
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
aaz
Aggregatibacter aphrophilus W10433
Pathway
aaz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ADJ80_03635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaz03400
]
ADJ80_03635
DNA repair and recombination proteins [BR:
aaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ADJ80_03635
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ADJ80_03635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
AAA_21
BCA_ABC_TP_C
AAA_25
DnaJ_CXXCXGXG
AAA_23
nSTAND3
Viral_helicase1
cobW
ScfRs
zf_C2H2_10
Motif
Other DBs
NCBI-ProteinID:
AKU62907
LinkDB
All DBs
Position
complement(734988..737819)
Genome browser
AA seq
943 aa
AA seq
DB search
MDTIDIRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PHHNVPLTAQTISQMVDKVLSLPEESKMMLLAPVVKERKGEHVKLLQQIAAQGYIRARID
GEICDLSDPPKLELQKKHTIEVVVDRFKVRSDLATRLAESFETTLELSGGTAVVAYMDDP
KAEALVFSANFACPHCGYSVPELEPRLFSFNNPAGACPTCDGLGVQQYFDEKRVVQNPSI
SLANGAIKGWDRRNFYYYQMLTSLAKHYHFDIETPFEELPKKIQQIILHGSGKEEIEFQY
MNDRGDVVLRRHVFEGILNNMARRYKETESMSVREELAKHISNRPCADCGGSRLRPEARN
VYIEQTNLPDVSEKSIGEALSFFGELQLSGQKAQIAEKILKEIKERLQFLVNVGLNYLSL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRNLGNT
VIVVEHDEDAILSADHIIDIGPGAGVHGGNVIAEGTAQQIMQNPNSLTGKFLSGVEKIEI
PKKRTALDKKKTLKLFGASGNNLKNVNLEIPVGLFTCITGVSGSGKSTLINDTLFPIAQN
ALNRAENAEAAPYKSIEGLEFFDKVIDIDQSPIGRTPRSNPATYTGVFTPIRELFAGVPE
ARARGYNPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDQCKGKRYNRETLEIRY
KGKTIHQVLDMTVEEAREFFDAIPMIARKLQTLMDVGLSYIRLGQSSTTLSGGEAQRVKL
ATELSKRDTGKTLYILDEPTTGLHFADIKQLLSVLHRLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGQIIATGTPEQVAKVEGSHTARFLKGILAKG
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggataccatcgatattcgtggggcaagaacccacaatctgaaaaatattaacttaacc
attcctcgtgataaattaatcgtcattaccggtttatccggctcaggcaaatcttcttta
gcttttgacacgctgtatgccgaagggcaacgccgttatgtagaatccttgtctgcctat
gcgcgtcaatttttgtcattaatggaaaaacccgatgtagaccatattgaagggctttca
ccggctatttctattgagcaaaaatccacctcgcacaacccacgttcaacagtgggtacc
attaccgaaattcacgattacctgcgtttgttgtttgcccgcgtgggcgaaccgcgttgc
cctcatcataatgtaccactcacggcgcaaactattagccaaatggtggataaagtgctt
tctctgcctgaagaaagcaaaatgatgttgttggcgccggtggtaaaagagcgcaaaggt
gaacacgttaaattattacaacaaattgccgcgcaaggttacattcgcgcccgtattgat
ggtgagatttgtgatttatccgatccgccaaaactggaattacagaaaaaacataccatt
gaagtggtggtggatcgctttaaagtgcggtcggatttagccacaagattagcggaatcc
tttgaaaccacgctcgagctttccggcggcacggcggttgtcgcgtatatggacgatccg
aaggcggaagcactggtattctctgccaactttgcctgtccgcactgtggctattccgtg
ccggaactggaacctcgtctcttctcctttaataaccccgccggtgcgtgcccgacttgt
gatggtttgggcgtacaacaatatttcgatgaaaaacgcgtggtacaaaatccaagtatt
tcccttgctaatggtgctatcaaaggctgggatcgccgcaatttctattattaccaaatg
ctcacgtccttggcgaaacactaccatttcgatattgaaacgccttttgaagaactgccg
aaaaaaatccaacagattattttgcacggttccggcaaggaagaaatcgaattccaatac
atgaacgatcgcggcgatgtcgtgttgcgtcgccatgtattcgaaggcattttgaacaac
atggcgcgccgttataaagaaacggaatccatgtcagtgcgggaagaactggcaaaacac
attagcaatcgcccttgtgccgattgtggcggttcgcgtctgcgtcccgaggctcgtaac
gtttatattgagcaaaccaatctgcctgatgtatcggagaaaagcatcggggaagccttg
agcttttttggagagctacaactgagcggacaaaaagcgcaaatcgccgagaagattctg
aaagaaatcaaagagcggttacaatttttggtgaatgtgggcttgaattatctttccctt
tcccgctctgccgaaaccctttcaggcggtgaagcacaacgcattcgtcttgccagccaa
atcggcgcaggcttggtcggtgtgatgtatgtattggatgaaccatccatcggcttgcat
caacgagataacgaacgcttgcttaataccctgattcacttacgaaatctcggcaatact
gtgattgtagtggaacacgatgaagatgcgattttaagcgccgaccatattatcgacatc
ggtccgggcgcgggtgtgcatggtggcaatgttattgccgaaggcacggcgcaacaaatc
atgcaaaatccaaactcgcttacaggtaaattcttatctggcgtagaaaaaatcgaaata
ccgaaaaaacgtaccgcacttgataagaaaaaaacactcaagttgttcggcgcatcaggc
aataacctgaaaaatgtcaacttagagattccggtgggcttattcacctgtatcaccggc
gtgtccggttcaggcaaatccacgttgataaacgacaccttgttcccgattgcccaaaac
gcgttaaatcgtgcggaaaatgcggaggctgcgccgtataaatccattgaaggtttggaa
ttcttcgacaaagttatcgatattgaccaaagcccaattggtcgtacaccgcgctctaac
cctgcaacctacacgggcgtgttcaccccgattcgtgagctgttcgccggtgtaccggaa
gcccgagcacgtggctacaacccgggacgtttcagttttaacgtacgcggcgggcgttgc
gaagcctgtcagggcgatggcgtaatcaaagtggaaatgcacttcctgccggatgtgtat
gtgccttgcgaccaatgtaagggtaaacgctacaaccgcgaaaccttggaaattcgctac
aaaggcaaaaccattcatcaagtgttggatatgaccgtggaagaagcgcgggaatttttc
gatgcgattccgatgattgcacgcaaactgcaaactctaatggatgtgggcctgtcttac
atccgcttgggtcaatcctccactaccctctccggtggtgaagcgcaacgggtaaaattg
gcgacggaactctccaaacgggatacgggaaaaaccctgtatattctggacgaaccgact
accgggctacactttgccgacatcaaacaactgctttccgtgttgcaccgcttgcgcgat
caaggcaataccatcgtggtcattgagcacaatttagacgtgattaaaaccgctgactgg
attgtggatctcggcccggaaggcggtagcggtggcggacaaattatcgccaccggtacg
ccggagcaggtcgctaaagtcgaaggttcgcataccgcgcgcttcctaaaaggtattctg
gcgaaaggttaa
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