Aggregatibacter aphrophilus W10433: ADJ80_04885
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Entry
ADJ80_04885 CDS
T04521
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aaz
Aggregatibacter aphrophilus W10433
Pathway
aaz03030
DNA replication
aaz03430
Mismatch repair
aaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ADJ80_04885 (dnaE)
03430 Mismatch repair
ADJ80_04885 (dnaE)
03440 Homologous recombination
ADJ80_04885 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aaz03032
]
ADJ80_04885 (dnaE)
03400 DNA repair and recombination proteins [BR:
aaz03400
]
ADJ80_04885 (dnaE)
Enzymes [BR:
aaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ADJ80_04885 (dnaE)
DNA replication proteins [BR:
aaz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ADJ80_04885 (dnaE)
DNA repair and recombination proteins [BR:
aaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ADJ80_04885 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AKU63136
LinkDB
All DBs
Position
991162..994638
Genome browser
AA seq
1158 aa
AA seq
DB search
MSQPRFVHLQVHSDFSMIDGIAKVKPLVKACVENNMVAMALTDFTNFCGLVRFYGEALSS
GVKPIIGADVLVQSDLCREERFRLTLLAKNNEGYKNITLLLSKAYERGYADVPYIDQQWL
VEHRTGVIVLSGGVNGDVGKKLLRSNTDELKSAVDFYHEFFPDHFYLTLTRTGRPDEERY
IQAALELAEREQLPVVATNDVCFLQADDFEAHEIRVAIHDGYTLEDPKRPKNYTGQQYFR
SEQEMCDLFADVPSALENTLLIAQRCNVTIRLGEYFLPQFPTGDLSTEDYLIKRAKEGLE
ERLKVLFPDEKVRAERRPEYDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNNIPVGPG
RGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEHVAEM
YGRGAVSQIITFGTMAAKAVIRDVGRVLGQPYGFVDRISKLVPPDPGMTLAKAFEAEPKL
QEIYDADEEVRAIIDMARKLEGVTRNAGKHAGGVVISPTLITDFSPLYCDSEGKHPVTHF
DKNDVEYAGLVKFDFLGLRTLTIIKWALDMINARMEKEGKPLVDINTIPLDDHQSFEVLL
NAETTAVFQLESRGMKDLIKRLKPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREEV
SYPDANYQHESLKPILEPTYGIILYQEQVMQIAQVLAGYTLGGADLLRRAMGKKKPEEMA
KQRSVFEEGAIKNGVDGDLSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAE
FMAAVMTSEMDNTDKIVGLYDECMRMGLKVVPPDINTGKHHFSVNENGEIVYGIGAIKGV
GEGPIAALVEAREKDGIFKNLFDLCARVDLKKINRRTFESLIKSGAFDKLGPHRAALQRN
LEDALRASDQHAKDEALGQTDMFGVLTETNEEVEHSYANIAPWTEKTILDGERETLGLYL
SSHPVSRYLKELSHYSPVRLKELTPNYRGQMSTASGLVVNTRIAVTKKGNHIGIATIDDR
SGRLDLTLFGEALDKFGEKLQKDTVIVVSGQVSFDDFSQGLRMSVRDLMTIDEARARYAK
SLAICLNQEQINTTFIKQFKAILAPYSGNTLPVHIYYFSPQGRALVKMGVQWSVNPTDEL
LGELVEFLGESAVELEFE
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagccacgttttgttcatttgcaggttcacagtgatttttccatgattgacggt
atcgccaaggtgaaaccgttggtgaaagcctgcgtagaaaacaacatggtggcgatggcg
ttgacggatttcaccaacttttgcggtttggtgcggttttacggcgaagcactgtcttcg
ggtgtgaaaccgattatcggggcagatgtgctggtgcaaagcgatctgtgtcgcgaggaa
agattccgtttaaccttgttggcaaaaaataacgagggctacaaaaatatcactttgttg
ctttccaaagcgtatgagcgcggttatgccgatgtgccgtatatcgatcagcagtggctg
gtggaacatcgtaccggggtgattgttttatccggcggcgttaatggcgatgtaggtaaa
aaattactacgcagcaatactgatgaacttaaaagtgcggtggatttttaccatgaattt
ttccctgatcatttttatcttaccctcacccgtaccggtcgtcctgatgaagaacgttat
attcaagccgcgttagaactggctgaacgggagcagttgccggtggtggcaacaaatgat
gtgtgctttttacaggctgacgattttgaagcccatgaaattcgcgtcgccattcatgat
ggctataccttagaagatccgaaacgtcctaaaaattataccggccaacaatatttccgt
tccgaacaagaaatgtgcgatttgtttgccgatgtgccgagtgcattggagaatacgcta
ctgattgcacaacgctgtaatgtcactattcgattgggtgaatatttcttgccacaattc
ccaaccggtgatttaagcaccgaagattatctgattaagcgtgccaaagagggcttggaa
gaacgcctcaaagtgttgttccctgatgaaaaagtgcgtgctgagcgccgtccggaatat
gatgaacgcttgcaggtggaattggatgtgatcaaccaaatgggcttcccggggtacttt
ttgatcgtgatggaatttatccaatggtcaaaagataataatattccggtggggccgggg
cggggttccggcgcgggatctttggtggcttacgcgttaaaaattaccgatttggatccg
ttggaattcgatttgctttttgagcgtttcctcaatccggaacgggtttccatgcctgac
tttgacgtggacttctgtatggatgggcgcgaccgcgtgattgaacacgttgctgaaatg
tatggacgcggtgcggtgtcgcaaattattacgttcggtaccatggcggcaaaagcggtg
attcgcgatgttggacgggtgctgggacaaccttatggctttgtggatcgtatttctaaa
ctagtgccaccagatcccggtatgacacttgctaaagcctttgaagcggaaccgaaacta
caagaaatttatgatgccgatgaagaagtccgagccattattgacatggcacgcaagctg
gaaggcgtcacacgaaatgccggtaagcatgccggtggagtggtgatttcgccaacgtta
attacagatttctcgccgctgtactgcgactcggaagggaaacatccggtgacccacttt
gataaaaatgacgtggaatatgccggtttggtgaagtttgacttcttaggcttacgtact
ttaaccatcatcaaatgggcgctggatatgattaacgcgcgcatggaaaaagaaggcaaa
ccgttggtggatatcaacactatcccattggatgatcaccaatcttttgaagtgttgctc
aatgccgaaaccacggcagtgttccagttggaatcgcgcggcatgaaagatttgattaag
cgcctcaagccggactgttttgaagatattatcgcgttggtggcgttgttccgccccggc
ccattgcaatcgggcatggtggataactttatcgaccgtaaacacgggcgcgaagaagtg
tcttatccggatgccaactatcaacatgaatcccttaaaccgattttggaaccgacctac
ggcattattttgtatcaagagcaggtcatgcaaattgcccaagtgttggcaggttacaca
ctgggcggtgcggacttattgcgccgtgcgatgggtaagaaaaaaccggaagaaatggcg
aaacagcgttccgtatttgaagagggggcaatcaaaaacggcgtggacggcgatctttcc
atgaaaatctttgatttggtggaaaaatttgcgggctatggctttaacaaatcacactct
gccgcctatgctttggtttcttatcaaaccctatggctgaaggcgcactacccggccgaa
ttcatggcggcggtaatgacttcggaaatggataataccgacaaaatcgttggcttgtat
gacgaatgtatgcgcatgggcttgaaggtcgttccacctgacattaacaccgggaaacat
cattttagcgtgaatgaaaacggcgaaattgtgtacggtatcggtgccattaaaggcgtg
ggcgaagggccaattgcggcgttggtggaagcccgtgagaaagacggtattttcaaaaat
ctgtttgatttatgtgcccgcgtggatttaaagaaaatcaatcgacgcacgtttgaaagc
ctgattaaatccggtgctttcgataaactcggtccgcatcgcgccgccttgcagcgaaat
ttggaggatgcgctacgtgcctccgatcaacatgccaaagatgaagctttagggcaaacg
gatatgttcggcgtgctgacggaaaccaacgaggaagtggagcattcctatgctaacatt
gcgccttggacggaaaagaccattttagacggtgaacgggaaactctcggattgtatttg
agtagccatccggtgagtcgttatttaaaagaattgtcccattacagcccggttcgcctg
aaagaattaacaccaaattatcgtggacaaatgagcaccgccagcggtttagtggtgaat
acgcgcattgctgtgaccaaaaaaggcaaccacattggcattgctaccattgatgatcgc
tccggtcgtttggatttgaccttgttcggcgaagcgctagataaattcggtgagaaattg
caaaaagacacggtgatcgtggtgtcgggacaggtaagttttgatgatttctcgcaaggc
ttacgaatgtctgtgcgggatttgatgacgattgacgaagcccgtgcccgttatgccaag
agcttggcgatttgtctgaatcaagagcaaattaacacgacatttattaaacagttcaag
gccattttagcgccttacagtggcaacacgcttcccgtccacatttactatttcagcccg
caaggccgcgctttagtaaaaatgggcgtgcaatggtcggtcaaccccaccgatgaactc
ctcggcgaattggtcgagtttttaggtgaaagtgcggtggagctggagtttgaataa
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