Aggregatibacter aphrophilus W10433: ADJ80_08025
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Entry
ADJ80_08025 CDS
T04521
Symbol
sbcB
Name
(GenBank) exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
aaz
Aggregatibacter aphrophilus W10433
Pathway
aaz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ADJ80_08025 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaz03400
]
ADJ80_08025 (sbcB)
Enzymes [BR:
aaz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
ADJ80_08025 (sbcB)
DNA repair and recombination proteins [BR:
aaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
ADJ80_08025 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ADJ80_08025 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ADJ80_08025 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AKU63695
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All DBs
Position
1716291..1717718
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AA seq
475 aa
AA seq
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MMAKNDFSFFIYDYESFGVNPATDRPAQFGGIRTDANFNIIGESVVLYCKQTNDYLPAPE
AVLVTGITPQECNEKGLPEPDFAARILQEFSQPNTCVMGFNNIRYDDEMTRYTFYRNFID
PYEYSWKNGNSRWDLLDLVRACYALRPDGVEWPLDDEGMPSFRLEKLTEANGIEHTNAHD
AMSDVYATIEMAKLIKQKQPKLFQYFFENRGKKEIEKLINTAEMTPLVHVSGMLGNYRGN
TTLIAPLAWHPTNKNAVIVCDLTANIDDLLTKSAEELRENLYTKKETLLEAGVLLVPLKL
IHINKCPIVAPEKTLLSQNAERLGIDRELCAQNQQRLLASKDIRQKVMDIFQQDREFEAS
DNVETELYNGFFSDADKNNMAILRTLEPEKLAEHNLRFQDPRIPQLLFHYRARHFYRTLN
RAEQIKWQKYCRKKLDAEILRFEQSLQELAAQNEHNEENLTLLQKVYEYGNKIIS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaaaaaacgatttcagctttttcatttatgactatgaaagttttggtgtcaat
ccggcaaccgatcgccctgcacaatttggtggtattcgtacagatgccaattttaatatt
atcggcgagtccgttgtgttgtactgcaagcaaaccaatgattatttgcctgctccggag
gctgtgttagtgacaggcattacaccacaggagtgtaatgaaaaaggcctgccggaaccg
gactttgccgctcgaattttacaggaattcagtcaaccgaatacctgtgttatgggcttt
aataatattcgttatgacgatgaaatgacacgctacaccttttatcgtaattttattgac
ccttatgaatacagctggaaaaacggtaattcccgttgggatttattggatttagtgcgt
gcgtgttatgccttgcgtcccgatggcgttgagtggcctttagatgatgaaggcatgccg
agttttcgtttggaaaaactgacggaagcgaatggaatagaacataccaatgctcatgac
gccatgtccgatgtgtatgctactatcgaaatggcaaaattaattaagcaaaaacagccg
aagttatttcaatatttctttgaaaatcgtggaaaaaaagagattgaaaagctcattaat
accgcagaaatgacaccgttagtgcatgtatcgggaatgttaggaaattaccgcggaaat
acgacattaattgcccctttagcttggcacccaacgaataaaaatgcggtgatagtgtgt
gatttaacggccaatattgatgacttactgacaaaatcggcagaggagttacgtgaaaat
ctttatacgaagaaagaaacgttattagaggccggagtgcttcttgttccgttaaagctc
attcatatcaataaatgtcctattgtagctccagaaaaaaccttattgtctcaaaatgct
gaacgtttagggattgatcgagagttgtgtgcacaaaatcaacagcgtttgttggcatct
aaggatattcgtcaaaaagtcatggatatttttcagcaagatcgcgagtttgaagcatct
gataatgttgaaactgaactttataatggcttttttagtgatgccgataaaaacaatatg
gcgattttacgcactttggagcccgaaaagctcgctgaacataatctgaggtttcaagac
ccaagaatccctcaattgttgtttcattatcgcgccagacatttttatcgtacattaaac
cgagctgaacaaattaaatggcaaaaatattgccggaaaaaattagatgctgaaattttg
cgatttgagcaaagccttcaagagttagctgcacaaaatgagcacaatgaagaaaacctc
actttattacaaaaagtttatgaatatggcaataagataattagttag
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