Aggregatibacter aphrophilus W10433: ADJ80_08435
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Entry
ADJ80_08435 CDS
T04521
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
aaz
Aggregatibacter aphrophilus W10433
Pathway
aaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ADJ80_08435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaz03400
]
ADJ80_08435
Enzymes [BR:
aaz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ADJ80_08435
DNA repair and recombination proteins [BR:
aaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ADJ80_08435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
ResIII
AAA_30
RbcX
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AKU63775
LinkDB
All DBs
Position
complement(1811281..1814943)
Genome browser
AA seq
1220 aa
AA seq
DB search
MQQLNPISTPLNAISLIEASAGTGKTYTMGSLYLRLLLQAGENAFPYALNVEQILVVTFT
EMATEELKKKIRERIYDAKQKFIVYQQTRDLCAFEQDDFLRGLAETITDLPLAIQRLTLA
EQNMDLAAIYTIHGFCRRMLVQYAFNSGIHFNLELSGEEDELLLHLAQNVWRTHFYSQPY
AVVEFIQQNLTSPSNVISRIKKLAGTELKLPKNPPHFFDGSLSEFLPKLADYSQQLTTRI
MEVKGKWLEKEAEIVELIETEVNTKYKNTKEQKLNRRSFTSATRPKWLAAMKQWAEKETA
DFPDCFYRFGQQAMNEQAGEACEHPLTHVVFGQIDELLQVLQQREYLAQALWFHYLNALN
TQLVEYKLNHSEKSFNDLLRLLKEALYHPQNTEFARLIRYQFPFAMIDEFQDTDAVQYQI
FSKIYVEQSQPDFQPDKGFIMIGDPKQAIYKFRGADIFTYFQAARQAEHCFNLDKNYRSE
QNVVACINHLFDFTENPPFLYQDIQFLPVKAREDHPQFWLNGKAEPAVRFYVDEVSVKEN
MAKNCAISIQHWLQSAVENQAVFSTDGQTVEKTLKPESIAVLVRSRKEAELIKNELRQLG
IASVYLSEDSNVFDSHVAKDLLLILIACLNPFSERHILNAVATEIFAQTSADIQHIRLNE
TLWEHWVEKFIQYQKTWQKQGVLVMLHRLFLQEKITEKWYPTADGKRIVTDLLHLAELLQ
EAATLNESEAALLRWFEKQIQGEDRQKEQQVRLESELQLVKIVTIHKSKGLEYDLVWLPF
IGYASSFKPNQLSTYFDEEQQQVLWDFDKSHIDLVQKEDFAEQLRLLYVALTRAKYQLVI
GVPQTFEKKWSSLLYVLTQGDIQTESKPNAYESRPLLDKLVAKAPANSIVITDTKTLTPL
PLRQQAEIQTTLQAAKFSGHIEQNWTVTSFSAIENIHQNKKYYKAQQAAESAVIFERVFD
GGKDYDFNEQPTETLPETASCESAYPFGYSPFDFPHGIKIGTALHRFLEKYDFSQPLNEE
KVQKLCQWLQLEETWLPSLQQWMNAILHTPLSAEEPTLKLANLSRRHCVKEMQFYLKLNQ
LFDVSAFNRALQQYHHLPSESLQFAAIRGMLRGFMDLVFYHNGKYYLLDYKSNFLGVEPQ
NYVGKSLEQAMLANHYDWQYLFYTLALHRYLQQRDANYDYETHFGGVFYCFLRGMNGENQ
HGVFFDKPDYALIQALENLF
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaactcaatcctatttctacgccacttaatgccatcagccttattgaagcttcc
gccggtacgggaaaaacctacaccatgggttcgctttatttgcgtttattgttacaggcg
ggggaaaatgcttttccttatgcgttaaatgtagaacagattctcgtcgtgacgtttacc
gagatggcgacggaagagttgaaaaagaaaatccgtgaacgaatttatgatgcaaaacag
aaatttatcgtttatcaacaaacacgggatttatgtgcatttgaacaagatgatttttta
cgtggattagccgaaacaatcaccgatttgcctcttgctatccaacgcctgactttggcg
gaacagaatatggatttggcggcgatttataccattcacggattttgtcgccgaatgctc
gtgcaatatgccttcaattctgggattcatttcaatttggaactgagcggagaagaagac
gaattgttgttacatttagcacaaaatgtgtggcgtacacatttttattcgcaaccttat
gctgttgtggaatttattcaacaaaacctcacttctccatccaatgtgatttctcgaatt
aaaaaacttgccggtacggaattaaaacttccgaaaaatccaccgcacttttttgatggt
tctttatccgaatttctccccaaacttgccgattattcacaacagttaacaacacgaata
atggaagtgaaaggaaaatggttagaaaaagaagcggaaatcgtggagttgattgaaacg
gaagtcaacaccaaatataaaaacacgaaagaacaaaaattaaaccgacgtagcttcact
tcagcaactcgcccgaaatggcttgccgccatgaaacaatgggcggaaaaagagaccgca
gatttccccgattgtttttatcgttttgggcagcaggcaatgaacgaacaagcaggggaa
gcgtgcgaacaccctttgacccatgttgtgtttggtcaaattgatgaattattacaagtg
ctccaacagcgcgaatatttggcacaagcgctgtggtttcattatttaaatgcccttaat
acgcaattagtggaatacaaactcaatcacagcgaaaagagttttaacgatttgttgcgc
ctgttaaaagaggcgttgtatcacccgcaaaataccgaatttgcccgtctgattcggtat
caattcccatttgccatgattgatgaatttcaagatacggacgcggtgcaatatcagatt
ttctcaaaaatttacgtagaacaatcgcagcccgatttccagccagataaaggttttatc
atgattggcgatccgaaacaggcgatttataaattccgtggtgcagacatttttacttat
ttccaagctgcccgccaagctgaacattgtttcaatttagataaaaactaccgttccgaa
caaaatgtggtggcttgcatcaatcatttatttgatttcaccgaaaatcccccgttttta
tatcaagatattcaatttttaccggtaaaagcgcgagaagatcatccgcaattttggtta
aacggaaaggctgagcctgccgtgcgtttttatgtagatgaagtctccgtaaaagaaaat
atggcgaaaaactgtgccatttctattcaacattggctgcaaagtgcggtggaaaatcag
gctgtttttagcactgatggtcagacagtagaaaaaacgctgaaaccggaaagcattgcc
gtcttggtgcgtagccgcaaagaagcggaattgattaaaaatgagttacgccaacttggc
attgcctcagtgtatttgtcggaagacagcaacgtatttgatagtcatgtggcgaaagat
ttgctactgatcctcatagcctgcctgaatccgtttagtgaacgccatattttaaatgcc
gtggcaacggaaatttttgctcaaacatctgccgatattcaacatatcagattgaatgaa
acgctttgggaacactgggtggagaaatttattcagtatcaaaaaacgtggcaaaaacaa
ggggtgttggtgatgttacaccgtttgtttttacaagaaaaaatcacggaaaaatggtac
ccaacggcagatggcaaacgcatagtcacagatttattacatttggcggaactgttgcag
gaagcggcaacgttaaatgaaagtgaggcggcgttgttgcgttggtttgaaaaacaaatt
cagggtgaagatcggcaaaaagagcaacaagtgcggttggaaagcgagttgcaattggtc
aagatcgtgactattcataaatccaaaggtttggaatacgatttggtttggttgccgttt
attggttatgcctcttcatttaaaccgaatcaactctccacttattttgatgaagaacag
caacaggtgctgtgggattttgataaatcgcatatcgacttggtgcaaaaagaagatttt
gccgaacaattacgtttgctttatgtcgcgttaacccgagccaaatatcagttagtcatt
ggtgtgcctcaaacctttgagaaaaaatggagtagtttgctttatgtgttgacgcaaggg
gatattcaaacggaaagcaaaccgaacgcgtatgaaagtcggccgttgttggataaattg
gtggcaaaagcgccggcaaatagcattgtgattaccgatacgaagacattaacaccatta
ccgttgcggcaacaggctgaaattcaaaccaccttgcaggctgccaaatttagcggacat
attgaacaaaattggacggtcaccagtttcagcgccattgaaaacattcatcaaaataaa
aaatattataaagcgcaacaggcagcggaaagtgcggtcatttttgagcgtgtttttgat
ggcggcaaggattacgattttaatgaacaaccgactgaaacgctgccggaaaccgcaagc
tgtgaatccgcctatcctttcggctattcaccttttgattttccgcatggcattaaaatc
ggtacggccttgcatcgattcttagagaaatacgattttagccaaccgttgaatgaagaa
aaagtccaaaaactttgccaatggttacagttagaggaaacttggctgccgtcgttacaa
caatggatgaacgctattttacatacgccgttaagtgcagaggagccgactttaaaattg
gcgaatttatcccgtcgccattgtgtgaaagaaatgcaattttatttgaaattgaatcaa
ttatttgatgtttcggcatttaatcgagcgttgcaacaataccatcacctgccttccgag
tcgctacaatttgccgctattcgaggaatgttacggggttttatggatttggtgttttat
cataatggcaaatattatttgctggattacaaatcaaatttccttggcgtagagccgcaa
aactacgttggcaaaagccttgagcaagcaatgctggccaatcattacgactggcagtat
ttattttacacgctggcattacaccgttatttgcaacagcgtgacgcaaactatgactac
gaaacccatttcggcggcgtgttttattgtttcttacgcggcatgaacggcgaaaatcaa
cacggcgtgttttttgataagccggattatgcgttgattcaggctttggagaatttattc
tga
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