Candidatus Koribacter versatilis: Acid345_0047
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Entry
Acid345_0047 CDS
T00352
Name
(GenBank) ATP-dependent DNA helicase, Rep family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aba
Candidatus Koribacter versatilis
Pathway
aba03420
Nucleotide excision repair
aba03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Acid345_0047
03430 Mismatch repair
Acid345_0047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aba03400
]
Acid345_0047
Enzymes [BR:
aba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Acid345_0047
DNA repair and recombination proteins [BR:
aba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Acid345_0047
MMR (mismatch excision repair)
Other MMR factors
Acid345_0047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
AAA_11
DEAD
LysM
ADDB_N
CTD
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABF39052
UniProt:
Q1IVP8
LinkDB
All DBs
Position
complement(43956..46505)
Genome browser
AA seq
849 aa
AA seq
DB search
MQFLEKLNPQQREAVETVHGPVLILAGAGSGKTRVITYRIAYLIEKVGVSPDSILAMTFT
NKAAAEMQERVEHLVGGRTLAKPVISTFHSFCVRVLRRDIEALQINGKGYRKDFAIYDES
DQQSLVKSAMKRLGIDDKQLTVRNVLSRISHAKNHLLDPQEVYLQSGDPKVERIAQIYKV
YESELAKANALDFDDLLLMTNKLLKTSTEVRERYNRRFQYVLIDEYQDTNRPQYEIMRAL
AGTLHNVCAVGDEDQSIYSWRGADIRNILEFEQDFPEAKIVRLEQNYRSTQNILEAASAV
VKNNLKRKGKNLWTERMGGAKVGYYEAPDGENESLFVADYINKYLMIAHDEDDEPKRAAV
LYRTNSQSRLFEEAMRRYGIKYNVVGGFSFYERAEIKDMISYLKLIQNPSDSVALLRTIN
TPTRGIGKTTVEQIERIALETNLPLWDALGHIVEQRLMQPRACAALKGFRELIQDARAML
YGKFEERLVETAQVSKPEESDAAEPEIADEDLQDNMAFDFGELEPDAEEFSPEALGTAEE
AAPEKVEGFRSPGENANVSEVLKFLIDRTGYIKQLEAEDTPESLARIENLRELVNAAMDS
RDRGETIADFLDHAALVADTDDIEAGAQVTLMTMHAAKGLEFPLVFIVGMEEGLFPSSRT
LMNPDEVEEERRLCYVGMTRAMRILVLSRARYRRRYGTDMPDASTASRFLSEVPPQLFED
IGSPQKKTPVFGDDSYSTHYDYENEDQRPQYGRTKQKTSYGGGSTYNSIDNIAEFFASRG
KKFNRPSVPMEEPHGKRGFRPGQKVKHPKYGEGTVYQREGEGEEAKITVQFPRFGLKKLV
EKFAQLEKA
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
ttgcagttcctcgaaaaactgaatccccagcagcgcgaggcggtggaaaccgtccatgga
ccggtgttgattctcgcaggcgcggggagcggcaagacgcgggttatcacctaccggatt
gcctacctgatcgagaaggttggggtgtcgccggactccatcctggcgatgacgtttacc
aacaaggctgccgccgagatgcaggagcgcgtggaacacctggtaggtgggcggacgctg
gccaagccggtgatttcgacgttccactcgttttgcgtgcgggtgctgcggcgcgatatc
gaggcactgcagatcaacggaaagggctaccggaaagatttcgcgatttacgacgagagc
gaccagcagtcgctggtgaagtcggcgatgaagcggctggggatcgacgataagcagctc
acggtgcgcaacgtgctctcgcggatttcgcatgcgaagaaccatctgctggatccgcag
gaggtgtacctgcaatccggcgatccgaaggtggagcggatcgcgcagatctacaaggtg
tacgaatcggagctggcgaaagcgaatgcgctcgacttcgacgacctgctgctgatgacc
aacaagctgctgaagacctcgaccgaggtgcgcgagcgctacaaccggcggttccagtac
gtgctgattgatgagtaccaggacaccaaccgtccgcagtacgagatcatgcgggcgctg
gcgggaacgctgcacaacgtgtgcgcggtgggcgatgaggaccagtcgatctactcgtgg
cgcggggcggacatccgcaacattctcgagttcgagcaggatttccccgaggccaagatc
gtaaggcttgagcagaactaccgttcgacgcagaacattctggaagcggcgtcggcagtg
gtgaagaacaacctgaagcggaagggcaagaacctgtggaccgagcgcatgggtggcgcg
aaggtcgggtattacgaggcgccggacggcgagaacgagtcgctgtttgtggccgactac
atcaacaagtacctgatgatcgcgcacgatgaagacgatgagccgaagcgcgcggcggtg
ctctatcgcaccaactcgcagtcgcgattatttgaagaagcgatgcggcgctatggcatc
aagtacaacgtggtcgggggcttcagcttctacgagcgcgccgaaatcaaggacatgatc
agctatctgaagctgatccagaacccgagcgactcggtggcgctgctgcggacgattaat
acgccgacgcgtgggatcgggaagacgaccgtcgagcagattgagcggattgcgctggag
accaaccttccgttgtgggatgcgttggggcacatcgtggaacagcgactaatgcagcca
cgggcgtgcgcggcgctgaagggcttccgcgaacttattcaggatgcgcgcgccatgctc
tacgggaagttcgaagagcgactggtggagacggcacaggtatcaaagcccgaagaaagt
gacgcggccgaaccggagattgcagacgaagatctgcaagacaacatggcgttcgacttc
ggagaactggagccggacgcggaggagttttcgccggaggccctgggcacggcggaagaa
gcggctccggagaaggtcgagggcttccgctcgcccggtgagaacgcgaacgtttccgag
gtgctgaagttcttgatcgatcgcacgggatacatcaagcagttggaggcggaagacact
ccggagtcgctggcgcggattgagaaccttcgcgaattggtgaatgcggcgatggactcg
cgggatcgcggagaaacgattgcggatttcctcgaccacgccgcgctggtggcggacacc
gacgacattgaagccggtgcgcaggtcacgctaatgacgatgcacgcggcgaaggggctg
gaatttccgctggtgttcatcgtcggcatggaagaagggctgtttccgagctcgcggacg
ctgatgaacccggatgaagttgaggaagagcggcggctttgttatgtcggaatgacgcgg
gcgatgcgcatccttgtgttgagccgggcgcggtatcggcgacggtatgggaccgacatg
ccggatgcgagtacggcttcgcggttcctgagcgaagtgccaccgcagttgtttgaagac
atcgggtcgccgcagaagaaaacgccggtgttcggcgatgactcgtacagcacgcattac
gactacgagaacgaagatcagcgtccgcaatatggacggacgaagcagaagacgagctat
ggcggcggctcgacatacaactcgatcgacaacattgcggagtttttcgcgtcgcgcggg
aagaaattcaatcgtccgagcgtgccgatggaagagccgcatgggaagcgcgggttccgt
ccgggacagaaggtgaaacaccccaagtatggggaggggacggtgtatcagcgcgagggc
gaaggggaagaagccaagattacggtacaatttccaaggttcggcttgaaaaaactggtg
gagaagttcgcgcagttggaaaaggcgtga
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integrated database retrieval system
