Candidatus Koribacter versatilis: Acid345_0948
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Entry
Acid345_0948 CDS
T00352
Name
(GenBank) DNA-3-methyladenine glycosylase II
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
aba
Candidatus Koribacter versatilis
Pathway
aba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Acid345_0948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aba03000
]
Acid345_0948
03400 DNA repair and recombination proteins [BR:
aba03400
]
Acid345_0948
Enzymes [BR:
aba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Acid345_0948
Transcription factors [BR:
aba03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Acid345_0948
DNA repair and recombination proteins [BR:
aba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Acid345_0948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
ABF39951
UniProt:
Q1IT49
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All DBs
Position
1207078..1208511
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AA seq
477 aa
AA seq
DB search
MLLDRQTCSRARLSRDPRFDGKFFIAVLTTRVYCRSICSARTCQEKNVRYYPTAAAAEEA
GFRPCLRCRPECSPGTPAWLGTPSTVTRGLRLLNERALDDGGIEYLAERLGIGGRHLRRL
FLQHLGASPRAVAQTRRLHFAKKLIDETSLPMSEVSEASGFGCVRRFNANIRATFHRTPS
QLRALARNAFETHEHEYVFRLRYRPPYHWLGMLDFLRPRATPGVECVTEDAYARSISLHG
KEGSFEVTHAPEQHSLVLRVNFEDSSALFQIVERVRAMFDLNADWGSIAGVLENDRLLRG
HLKGDPGRRLPGAWDGFELAVRAVLGQQISVAAATNLAGQIARKFGRPLRKSNGISHLFP
TPEILADAASLPLPMKRAETIRALACAVRDCELQFDAITDVPQFCEQLKTIPGIGDWTAQ
YVALRALREPDAFPAGDLGLQKSLGVKSSAELERRAENWRPWRGYAAIYMWSAGHSL
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgctcctcgaccggcagacgtgttcgcgggcgcggttgtcgcgcgatcctcgcttcgac
ggcaagtttttcatcgccgtcttgaccacgcgggtgtactgccgctcgatctgttccgcc
cgcacctgtcaggagaaaaatgtgcggtactacccaaccgccgccgcggcggaagaggca
ggatttcgtccgtgcctgcgctgccggccggagtgctcgcccggaacgccggcgtggctg
ggaacgccgagcacggtgacgcgcgggcttcgcttgctcaacgagcgcgctctcgatgac
ggtggaatcgaatatctggcggagcggttaggaattggcggacgccacttgcgccgattg
ttcctccagcatctgggagcatcgccacgcgcggtggctcaaactcggcgattacatttc
gcgaagaaactgattgatgaaaccagcctgccgatgagcgaggtctcggaggcatcaggc
ttcggctgcgtacgacggtttaatgcaaacatccgcgcgaccttccatcgcacgccgtcg
caactgcgcgcgctggcgaggaatgcgtttgaaacgcacgagcacgaatatgtgtttcgg
ctgcggtaccgtccgccgtatcactggctcgggatgttggattttctgcgtccgcgcgcg
acacccggcgtggagtgcgtaacagaagacgcttacgcccgatcgatctcgttacacggt
aaagagggaagcttcgaagtgacccacgcaccggagcagcactcgctggtgttgcgcgtg
aacttcgaggactcgtcggcgttgtttcagattgtggagcgcgtccgcgcgatgtttgac
ctgaacgcagactggggttcgattgccggggtgctcgagaacgatcggctacttcgcgga
catctgaagggcgatccggggcgacgtttgcctggggcttgggatggctttgaactcgcc
gtccgggccgttctcggccagcagatcagcgtggcagcggcgaccaatctcgccggacaa
atcgctcgcaagttcggacggcccttgcggaagtcgaatgggatctcgcatctgtttccg
actcccgaaattctggcagacgctgcttccttgccgctgccgatgaaacgggcggaaacc
atccgcgcgttggcgtgcgcggtccgcgactgcgagcttcagttcgatgcaattaccgac
gtgccgcagttctgcgaacaattgaagaccatcccgggaatcggcgactggacggcgcag
tacgttgccctgcgggcgctacgcgagcccgacgcgtttcccgcaggcgacctcggcctg
caaaaaagcctgggcgtgaaatcgtcggcagagttagagcgaagggcagagaactggcgg
ccctggcgcgggtacgctgccatctatatgtggagcgctggacactcgctgtaa
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