Candidatus Koribacter versatilis: Acid345_1264
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Entry
Acid345_1264 CDS
T00352
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
aba
Candidatus Koribacter versatilis
Pathway
aba00260
Glycine, serine and threonine metabolism
aba00460
Cyanoamino acid metabolism
aba00630
Glyoxylate and dicarboxylate metabolism
aba00670
One carbon pool by folate
aba00680
Methane metabolism
aba01100
Metabolic pathways
aba01110
Biosynthesis of secondary metabolites
aba01120
Microbial metabolism in diverse environments
aba01200
Carbon metabolism
aba01230
Biosynthesis of amino acids
aba01240
Biosynthesis of cofactors
aba04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
aba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Acid345_1264
09102 Energy metabolism
00680 Methane metabolism
Acid345_1264
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Acid345_1264
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Acid345_1264
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Acid345_1264
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Acid345_1264
Enzymes [BR:
aba01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Acid345_1264
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Ortholog
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
ABF40266
UniProt:
Q1IS84
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All DBs
Position
1535174..1536454
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AA seq
426 aa
AA seq
DB search
MSNRMSQSLNEEDPQIAEAIANEERRQHEGLELIASENFVSEAVLQAAGSVFTNKYAEGY
PGKRYYGGCEYADVVENLARDRAKELFGAEHANVQPHSGSSANMEAYGAILQPGDTILGL
NLAHGGHLTHGHPLNFSGKTYKIVPYGVTKETETIDYDELEKLALEHHPKVIVGGGSAYP
RIFDFKRMREIADKAGALFMVDMAHFAGLVAGGAHPSPVPHAHVVTTTTHKTLRGPRAGM
ILSKQEFAAAIDKVTFPGMQGGPLVHIIAAKAVCFKEAMEPSFKDYANQVVANAKVLAQS
LADQGFRIISGGTDTHLMLIDVFAAGMLGSEAEKALGEAGITVNKNAIPFDTNPPMKPSG
VRIGTPALTTRGMKEPEMRQVGIWIAESLRHRTDPDFLGRVRRQVHELCDAYPLYPERRA
TRLATV
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatcgcatgtctcaatcgttaaacgaagaagatccgcagatcgcagaggcgatc
gcgaatgaggaacgccgtcagcacgagggtctcgagctcatcgccagcgaaaattttgtc
agcgaagcagtgcttcaggccgcgggctcagtattcaccaacaagtacgccgaggggtat
ccgggaaagcgctactacggcggctgcgagtatgccgatgtggttgagaacctggcgcgc
gatcgcgcgaaggaactcttcggcgcggagcacgctaacgtgcagccgcactccgggtca
tccgccaacatggaagcctatggcgcgatccttcagcccggcgacacaattcttggtctg
aaccttgcgcatggtgggcacctcacccacggacatccactgaacttttccggtaagacc
tacaagatcgtcccgtacggcgtgaccaaagaaaccgagaccatcgattacgacgagctc
gagaagcttgcgctggaacaccatccgaaggtgatcgtcggcggaggcagcgcgtatccg
cgtattttcgatttcaagcgcatgcgcgaaatcgccgacaaagccggcgcgctcttcatg
gtagatatggcacacttcgccggactggttgccggcggcgcacatccttcgccggtgccg
catgcgcacgtcgtgacgaccaccacgcacaagacactgcgtggaccgcgcgcgggcatg
atcctctccaagcaggaattcgcagcggcgattgataaagtcacattccccggcatgcag
ggagggccgctggtgcacatcatcgcggccaaggccgtgtgcttcaaagaagccatggag
ccgagcttcaaggactacgcgaaccaagtggtcgcgaacgcgaaggtgctggcgcagtca
ctcgccgaccagggcttccgcattatttccggaggcaccgatacgcacctgatgctgatc
gatgtcttcgcggccggaatgttgggcagcgaagccgaaaaggcgttgggcgaagctgga
atcacggtgaacaagaacgcaattccgtttgacaccaacccgccgatgaagccgagcggc
gtccgcattggaacgccggcgcttacgacgcgcgggatgaaggaaccagagatgcggcag
gtcggcatctggattgcggagtcgttacggcaccgcacggatccggatttcctcggccgc
gtgcggcgacaggtgcacgagctttgcgatgcgtacccgctgtatccggagcggagagca
acccggctggcgacggtatag
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