Candidatus Koribacter versatilis: Acid345_1274
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Entry
Acid345_1274 CDS
T00352
Name
(GenBank) regulator of RNA terminal phosphate cyclase
KO
K14414
transcriptional regulatory protein RtcR
Organism
aba
Candidatus Koribacter versatilis
Brite
KEGG Orthology (KO) [BR:
aba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aba03000
]
Acid345_1274
Transcription factors [BR:
aba03000
]
Prokaryotic type
Other transcription factors
Others
Acid345_1274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA
AAA_5
AAA_16
AAA_lid_14
Mg_chelatase
AAA_22
ATPase_2
AAA_19
AAA_14
AAA_30
NACHT
NTPase_1
AAA_2
TsaE
KAP_NTPase
AAA_7
T2SSE
ResIII
AAA_29
IstB_IS21
MCM
Guanylate_kin
Motif
Other DBs
NCBI-ProteinID:
ABF40276
UniProt:
Q1IS74
LinkDB
All DBs
Position
1548168..1549868
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AA seq
566 aa
AA seq
DB search
MGIRKLLIECTLCVRGGNLSCSLFAYILRFIHMKNRERRPTVVVGLLGTTLDLGKHPDRW
QNWRPSVAICRQPDLIVDRFELLHGRREQSLAELVRADIGTASPETEVVLHNVEFSDPWD
FEQVYEKLFSFARGYTFDDGEDYLVHITTGTHVAQICLFLLTESRHIPGKLLQSSPDRER
GGAGTVKVIDLDLSKYDRIASRFRQEQQEGASFLKGGIETRNEGFNRLIERIEKVANATR
DPILLTGPTGAGKSRLARKIFELKKQRHAVAANFVEVNCATLRGDGAMSALFGHSKGAFT
GAVTERLGLLRSANGGVLFLDEIGELGLDEQAMLLRAIEEKVFLPLGSDREVKSDFQLIA
GTNRDLLQAVRDGKFREDLLARINLWMFQLPGLADRVEDIEPNLAFELEQFAARNGDRVA
FNKEAYQHFLQFARSSEAKWSGNFRDLNAAVVRMATLSAGGRISIEIVREEIRRLADSWS
RSEGGHPSDLSLVVAPEVLVQMDLFDQLQLAQVVEVCRAARSLSVAGRRLFGVSRTRKAT
GNDADRLSKYLGRFGLSWNEVRAGSR
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
gtgggtatccggaagttgctgattgagtgtactttatgcgttcgcggtgggaatttatcg
tgctcactattcgcttatattctaagatttatacatatgaagaaccgtgagcgccgtccg
acggtcgtcgtggggctgcttggaaccacgctcgaccttgggaaacatccagaccgctgg
cagaactggcgaccatcggtggcaatttgtcggcagccggatctcattgtcgaccgcttt
gagttattgcatgggaggcgcgagcaatcgctggccgagttggtgcgagcggatatcggg
acggcgtcgccagagactgaggttgtgctgcacaacgtcgagttcagcgatccgtgggac
ttcgagcaggtctacgagaagctgttctcgtttgcgcgcggctacacgttcgacgatgga
gaggactaccttgtgcacatcacgaccggcactcacgtcgcgcagatttgcctgtttctg
ctgacggagtcgcggcatattccgggcaagttgctgcagtcgtcaccggaccgcgaacgt
ggtggcgcaggtacggtgaaggtcatcgacctcgatctgtcgaagtacgatcgcatcgca
tcgcgatttcggcaggagcagcaggagggcgcgtcgttcctgaagggcgggattgagacg
cggaacgagggattcaaccggttgatcgagcggattgagaaggtggcgaatgcgacgcgt
gatccgatcctgctcactgggccgaccggcgcgggaaagtcacgattggcgcggaagatc
ttcgaactaaagaagcagcgtcatgcggtggcggcgaactttgtggaggtgaactgcgcg
acgctgcgtggcgatggcgcgatgtcggcgctgtttgggcacagcaaaggtgcgtttacc
ggggcggtgaccgaacgcctggggttgttgcgctcggcaaacggcggcgtgttgttcctg
gatgaaatcggagagctgggactcgatgagcaggcgatgctgttgcgcgccattgaagag
aaggtgtttctgcctctcgggtccgacagggaagtgaagagcgatttccaattgattgcg
gggaccaaccgcgacctgttgcaagcggtccgggacggcaagttccgcgaggacctgctc
gcgcgtattaatctttggatgtttcaactgcccggtctcgccgaccgggtggaggacatt
gagccgaaccttgcgtttgaactggagcaattcgcggcgagaaacggcgatcgagtggcg
ttcaacaaggaggcgtatcagcacttcctgcaattcgcgcgatcgtcggaagcgaagtgg
tcgggaaatttccgcgatctgaatgcagccgtggtgcgaatggcgacgctatcggcgggc
gggcggatttcgattgagattgtgagggaagagattcggcggcttgctgactcatggtct
cgcagcgagggagggcatccgagcgatctttctcttgtcgtcgccccggaagttctcgtg
cagatggatttgttcgatcagttgcagcttgcccaggtcgtcgaagtttgtcgggccgcg
cgatcgctgtccgtcgcggggcggcgtctctttggcgtttcgaggaccaggaaggcaacg
gggaatgatgctgatcgtctcagcaaatacctgggacggtttggattgtcgtggaacgaa
gtgcgcgcagggtcccgctag
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