Candidatus Koribacter versatilis: Acid345_1467
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Entry
Acid345_1467 CDS
T00352
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
aba
Candidatus Koribacter versatilis
Brite
KEGG Orthology (KO) [BR:
aba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aba03019
]
Acid345_1467
03009 Ribosome biogenesis [BR:
aba03009
]
Acid345_1467
Messenger RNA biogenesis [BR:
aba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Acid345_1467
Ribosome biogenesis [BR:
aba03009
]
Prokaryotic type
rRNA processing factors
Acid345_1467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
ABF40469
UniProt:
Q1IRN1
LinkDB
All DBs
Position
1773461..1776556
Genome browser
AA seq
1031 aa
AA seq
DB search
MNKELYVSSNPHETRVALVEDDQLAEIFYERENEYTLAGSIYKGRVTRVLPGMQSAFVDV
GLERDAFLYVSDFLDLQDEEDEDFEVAVKTNGTADNTREERPARRDNRREERHGREERQA
REDRPSRENRREPRRNREERQPPGEPQQPTAIFEGGYSEAEEETEEASVETAGTEEGNST
AEENGDGEGTSRWRGRRRRRGGRRGRNGERFERTETQQQAASASAAESEVEEEEQPEVHE
EAAPVPEAEVEEQPRREREDQGRRDRAERGTRRGRDRGGRDRDRGDRESGGGDFGPPPGY
QPIVMPGESLSKYRNRPAAAETHVEHPAHEQTLETHEPVQHEEHESNTQEEAASIVAAAF
EEHAVPAVTHEEAVSEPHTEEVSEAAQQHDEEPTEGFAELRAPRQVAEMRVDPEAEAYRK
DVEDEFEEEEQVEEAERAEQESAAEALSAPAAEVAQDEEALSSELEAQPVAEDDDVTYHR
VTEYEAPPRILPETAPVGKTLEHETFDGEESGESVQLAEDDAAEADMELEEETLEAGGEN
SGRWIPQVADIEEDFHEHQAEDFEYSNGNGEAVEAAEGEFEEEGEEEGDGEEEEAVAGET
GSKPRRQFDRGRRGRRGRRGGPPMKNMQSRNTPLISDLLKEGQEILVQIAKEPIGKKGAR
ITSHIALPGRFLVYMPTVNHVGVSRKIASDEERQRLKRIVSSERENGHGGFIVRTAAANV
KEDELRADIRFLKHLWSEIKGRSDKSKSPALIYHDLNLVERVLRDQVTSDFTTIWVDNES
EYERVLRFASRFQPSLVRRIKLYTKNTPLFEEFGIQEEINKALKAKVWLKSGGYIVINQT
EALVAIDINTGKYVGKTTRLEDTIVKTNVDAIKEIVRQIRLRDLGGIIVIDFIDMDERKN
RQKVMAALEEALKSDRAPSKVLQFNDFGLVAITRKRVKQSLERTLGTPCSYCEATGFVKS
VPTMCSEIYTEVRKLAKHLDGKDVTIRVNPEVAKAIKENNGKLVQEFEELTGKTVIVKSD
PAMHQEHFDIH
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggaactgtacgtctcttccaatccacacgaaacccgtgtggcgctcgtggaa
gatgatcagctcgcggagattttctacgaacgcgagaacgaatacaccttagcgggatcc
atttacaaagggcgcgtcacgcgagttctacccggaatgcaatcggcattcgtggacgtc
gggcttgagcgcgatgcatttctgtatgtctcggattttctcgaccttcaggacgaagaa
gacgaggattttgaagtagccgtcaaaaccaacggcactgccgacaacacgcgcgaggag
cgaccggcgcgccgcgacaatcgtcgtgaagagcgtcacggccgcgaggaacgccaagct
cgtgaagatcgcccaagccgggaaaatcgccgcgagccgcggcgcaatcgtgaggagcgc
caaccgcctggtgagccgcagcagccgaccgcaattttcgagggtggctacagcgaagct
gaagaagaaactgaggaagcctctgtcgaaaccgcgggaactgaggaagggaactccact
gcggaagagaacggcgatggagagggcacgagccgctggcgtggacgccgccgccgccgt
ggtggacgccgcggacgcaatggtgaacgttttgaacgcacggaaactcagcagcaggct
gcgtcagcctccgcggcagagtccgaggtcgaagaggaagaacagcctgaggtgcacgaa
gaagctgcaccggtcccggaagcagaagttgaagagcagccccgtcgcgagcgagaagat
cagggtcgtcgtgaccgcgccgagcgcggcactcgccgaggacgcgaccgtggcggtcgt
gaccgcgaccgcggtgatcgtgagagtggtggtggtgattttggaccgcctcccggatat
cagccgatcgtcatgccaggcgaatcgctttcgaagtatcgcaaccgtcctgcggcagcc
gaaactcatgttgagcacccggcgcacgagcaaacgcttgagacgcacgaacctgttcag
catgaagagcacgagtcgaacacacaggaagaagctgcgagcatcgtggccgccgccttt
gaagagcacgcagtacccgcggtaacgcacgaagaggccgtctctgagccgcacacggaa
gaagtctccgaagcggcacaacagcacgacgaagagcccactgaaggctttgccgaattg
cgcgccccgcggcaagtcgcggaaatgcgtgtggatccggaagcggaagcctatcggaaa
gacgtcgaagacgaattcgaggaagaagaacaggtcgaagaagccgaacgtgccgagcag
gaaagcgcggcagaagctctgagtgcccctgcggcagaagtcgcgcaagacgaagaggca
ctcagctccgaactcgaagcccagcccgtggctgaagacgacgacgtcacttaccatcgc
gtcaccgaatacgaagcgccgccccgcatccttcccgaaaccgcacctgtgggtaagacc
ctcgagcacgaaaccttcgatggcgaagagtccggagaatccgtgcaactggccgaagac
gacgccgccgaagccgacatggaactcgaagaagaaactctcgaggccggtggcgaaaac
tcgggtcgatggattcctcaggtcgccgatatcgaagaggactttcacgagcatcaggcg
gaagactttgagtactcgaacggcaacggcgaagccgtagaagccgctgaaggcgagttc
gaagaggaaggcgaagaagaaggcgatggcgaagaagaagaggctgtcgccggagaaact
ggcagcaagcctcgacgccagtttgatcgtggacgtcgcgggcgtcgtggacgccgcggt
ggaccgccgatgaagaacatgcagtcgcggaacactccgctgatctccgacctcctaaaa
gaaggtcaggaaattctggtccagatcgcgaaggaaccgatcggtaagaagggcgcgcgc
atcacgagccacattgccctgccgggacgtttcctcgtgtacatgccgaccgtcaaccac
gtcggcgtgtcgcgcaagatcgcgtccgacgaagagcgtcagcgcctgaagcgcatcgtg
agtagcgagcgcgagaacggccatggcggcttcatcgtgcgcactgcagcagcgaatgtg
aaggaagacgagctccgcgctgacatccgcttccttaagcacctgtggagcgaaatcaaa
ggccgctccgacaagagcaagtcgccggcgctcatctaccacgatctcaacctcgtggag
cgcgtgctgcgcgaccaggtgaccagcgacttcaccaccatctgggtcgataacgaatcc
gaatacgaacgcgtactgcgcttcgccagtcgcttccagccgtccctggtgcggaggatc
aagctctacaccaagaacacgccgctcttcgaggagttcggaatccaggaagagatcaac
aaggcgttgaaggcgaaggtgtggttgaagagcggtggctacatcgtgatcaaccagacg
gaagccctcgtcgcgattgatatcaacaccggcaaatacgtcggcaagacgacacgcctc
gaagacaccatcgtgaagacgaacgtggacgcgatcaaagagatcgtgcgccaaatccgc
ttgcgcgatcttggcggaatcattgtgatcgacttcatcgacatggatgagcgcaagaac
cgccagaaggtcatggctgcgctcgaagaagctctgaagtccgatcgcgcgccttcaaag
gtgctccagtttaacgacttcggactagtggcaatcacccgtaaacgcgtcaagcaatcg
ctggaacgcacgctgggcacgccgtgttcgtactgcgaagcgactggcttcgtgaagtcc
gtgccgactatgtgcagcgagatctataccgaagttcggaagctcgctaagcatctcgat
ggtaaggacgtgacgatccgcgtgaacccggaagtcgcgaaagcgatcaaggaaaataac
ggaaagctggtccaggaattcgaagaactcacgggcaaaaccgtgatcgtgaagagcgat
cccgcgatgcaccaggaacacttcgacattcactaa
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