Candidatus Koribacter versatilis: Acid345_1988
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Entry
Acid345_1988 CDS
T00352
Name
(GenBank) ABC peptide transporter, periplasmic ligand binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
aba
Candidatus Koribacter versatilis
Pathway
aba02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
aba00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Acid345_1988
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aba02000
]
Acid345_1988
Transporters [BR:
aba02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Acid345_1988
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ABF40989
UniProt:
Q1IQ61
LinkDB
All DBs
Position
complement(2381467..2382984)
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AA seq
505 aa
AA seq
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MRKLLFALVAMLLFSLSCALSKPDPNTLVMIIESSPTNLDPRIGLDAQSERVDELLFDAL
VRRDEHFNLQPSLAERWEIPDPLTYIFHLRHDVRFHNGQLLTSRDVKWTLDSLISGKLIS
PKASTYNSISSVEAPDDWTVILHLKQAYSSLLWNLSDGAFGVVPNGSTGSFSQQPIGSGP
FKFVSARQDRDLVIERNDQYWGEKPHLQRVRFIVVPDETTQALELRKGSADAVINALKAD
TVRVLQNEKSIQIDVSPGSNYAYLAFNMRDPILKDVRVRQAIAYAIDRQEIIHYLMNDMA
KPANSVLPPQSWASNPGAKGYPHDPDAANRLLDSAGYMKKNGNRFQLAMKTSTDGATRVL
AAALQQQMRAIGIDLQIRTFEFATFYSDVTKGAYQIHSLRWIGGNQDPDIFESIFATDSF
APKRQNRTFYSNPRVDELIKIGRSTVKQEDRKRAYFELQEIVNRDVPYVNLWYFDNVLVH
TVRVRNLHVSAAGNYDFLLTAELAN
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaagctgctcttcgcgctggttgctatgctgctgttttctctttcctgtgcgctc
agcaagcccgaccccaacacgctagtgatgatcatcgagagcagcccaacgaatctcgat
ccccgcatcggcctcgacgcgcaatccgaacgcgtcgacgaacttcttttcgacgccctc
gtccgtcgcgacgaacacttcaacctccaaccctctctcgccgaacgatgggaaatccca
gacccgctgacgtacatctttcatctgcgacacgatgtccgcttccacaacggtcaattg
ctcacttcacgggatgtgaagtggactctcgactctctcatttccggcaagctcatcagc
cccaaggccagcacgtacaacagcatctcgtccgtcgaagcgcctgatgactggaccgtc
atccttcatctcaagcaagcatattcgtccttgctttggaacctgagcgacggcgccttc
ggggtcgtccccaacggcagcaccggcagcttctcgcaacagccgattggttctggtccg
ttcaagttcgtctcagcgcgccaggaccgcgatctggtgatcgagcgcaacgatcagtac
tggggcgagaaacctcacctgcagcgcgtgcgcttcatcgtggtgcccgacgaaaccacg
caggccctcgaactccgtaaaggcagcgccgatgctgtgatcaacgctctgaaagccgac
accgttcgcgtgctccagaacgaaaagagcatccagatcgacgtctcaccgggcagcaac
tacgcctacctcgccttcaacatgcgcgacccgatcctcaaagacgtgcgcgtgcggcag
gcaatcgcatatgccattgatcgccaggagatcatccactatctgatgaacgacatggcg
aagcctgcgaacagcgtgcttccgccgcaaagctgggccagcaatccgggcgcgaagggt
tatccccatgatcctgacgcggccaatcgcctgctggatagcgctggctatatgaagaaa
aacggcaaccgttttcaattggcgatgaaaacatccaccgatggcgccactcgtgtgctc
gccgccgcgttgcaacaacagatgcgagcgatcggcattgatctgcagatccgcaccttt
gagttcgccactttctattccgacgtaaccaagggcgcctatcagatccactcgttgcga
tggatcggcggtaatcaagaccccgacatcttcgagagcatcttcgccaccgatagtttc
gcgccgaagcgccagaaccgcaccttctactccaatcctcgcgtggacgaactcatcaag
atcggtcgcagcacggtgaagcaagaggatcgcaagcgcgcctatttcgaactgcaagag
atcgtgaatcgcgatgtcccttacgtgaacctctggtacttcgacaacgtcctcgtccat
acagttcgagtgcgcaacctgcatgtctctgcggccggcaattacgattttctgctgacg
gccgaactcgcaaattag
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