Candidatus Koribacter versatilis: Acid345_2144
Help
Entry
Acid345_2144 CDS
T00352
Name
(GenBank) SSU ribosomal protein S12P methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
aba
Candidatus Koribacter versatilis
Brite
KEGG Orthology (KO) [BR:
aba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aba03009
]
Acid345_2144
Enzymes [BR:
aba01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Acid345_2144
Ribosome biogenesis [BR:
aba03009
]
Prokaryotic type
ribosomal protein modification factors
Acid345_2144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Fe_hyd_lg_C
Motif
Other DBs
NCBI-ProteinID:
ABF41145
UniProt:
Q1IPQ5
LinkDB
All DBs
Position
complement(2561769..2563283)
Genome browser
AA seq
504 aa
AA seq
DB search
MPETKSSVSTLEQPETKPKKVGFVSLGCPKNLVDSEVMMGLLATNGAEITARAEDADIIV
VNTCSFIDTAKQESVDTILEMAGHKATGRAQKLIVAGCLVERYRNEIQKNIPEVDAVVGT
GELEAILAASGIEPRKSEANSPFVILNSTSASQQLKSGIADRPEGAAREEAGRFARTDWD
GAVADLPNYLYDENTPRVLATPKYMAYIKVAEGCDHPCSFCIIPQLRGKFRSRRFESVVA
EAERLAKQGVKEITLIGQDTTCYGEDLGLKDGLAQLLERLAQIEELQWVRFLYAYPNKIT
KRLLQTIADNPKIPKYMDVPLQHSAANVLKRMKRGAHGDIFLKSIEEMRRVIPDLTLRTS
FIVGFPGETEEDFNQLCEFVKAAQIDWLGVFSYSDEEGAKAFALDEKVPPREIERRRKKL
MSLQKQISKKKRKALIGREFDVILEGPSEETDLLWEGRTAMHAPEIDGKVYINDFAEHEN
VEPGQVFRCEITEAHDYDLVARLL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaacgaagtcttctgtgagcaccctggaacagccggaaaccaagccgaagaag
gtcggtttcgtgtccctgggctgcccgaaaaatttggtcgattccgaagtaatgatgggc
ctgctggccaccaatggcgccgagatcaccgcgcgcgccgaagatgccgacatcatcgtc
gtgaatacctgctcgtttatcgacaccgcgaagcaggagtcggtcgacaccatcctcgag
atggcaggccacaaggcgaccggacgcgcgcagaagctgatcgttgctggatgcctggtc
gaacgctatcgcaacgagatccagaagaacattccggaagtggatgctgtcgtcgggacc
ggcgaactcgaagccatccttgccgcgagcgggatcgagccacgcaagtccgaagcgaac
tctcctttcgtcatcctgaattccacgagcgccagccagcagttgaagtccggcatcgcc
gatcgtcccgaaggcgcagcccgcgaagaggctggacgcttcgcacgaacagattgggac
ggcgctgtcgccgacctccccaactatctctacgacgagaacacgccgcgcgtgcttgct
acgccgaaatacatggcgtacatcaaggtcgccgagggctgcgatcatccctgctcgttc
tgcatcattccgcagttgcgcggcaagttccgctcacgccgctttgaatcggtcgttgcc
gaagctgaacgcctcgccaagcaaggcgtcaaagaaatcaccctcatcggccaggacacc
acctgctatggcgaagatctcggcttgaaagacggccttgcgcagttgctcgagcgtctc
gcgcagatcgaagaactccagtgggtgcgcttcctctacgcctacccgaacaagatcacc
aagcgcctgctgcagacgatcgccgacaatccgaagatcccgaagtacatggacgtgccg
ctgcaacattccgccgccaacgtcctgaagcgcatgaagcgcggcgcgcacggcgacatc
ttcctcaagtccatcgaagagatgcggcgcgtgattcccgatctcacgcttcgtacgtcg
ttcatcgttggcttccccggcgaaacggaagaagacttcaaccagctttgcgagttcgtc
aaggctgcgcagatcgattggctcggtgtcttcagctactccgacgaagaaggcgcaaag
gccttcgcactcgatgaaaaagtcccgccgcgcgaaatcgaacgccgccgtaagaagctg
atgtcgttgcaaaagcagatcagcaaaaagaaacgcaaggctctgatcggccgcgaattc
gatgtcattctcgaaggcccatcggaagaaaccgacctcctctgggagggtcgcactgcg
atgcatgcgccggaaattgacggcaaggtttacatcaacgatttcgcagaacacgagaac
gttgagcccggccaagtgttccgctgcgaaattaccgaagcccacgactacgacctggtg
gcccgcttactttaa
DBGET
integrated database retrieval system
