Candidatus Koribacter versatilis: Acid345_2203
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Entry
Acid345_2203 CDS
T00352
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aba
Candidatus Koribacter versatilis
Brite
KEGG Orthology (KO) [BR:
aba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aba03016
]
Acid345_2203
Enzymes [BR:
aba01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Acid345_2203
Transfer RNA biogenesis [BR:
aba03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Acid345_2203
Prokaryotic type
Acid345_2203
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ABF41204
UniProt:
Q1IPJ6
LinkDB
All DBs
Position
complement(2624692..2625600)
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AA seq
302 aa
AA seq
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MPLDAVLVIDKPAGWTSHDVVARLRRVLSERSAGHLGTLDPMATGVLPVVLGRYTRLSQF
YNHSEKSYEGEIRFGFATNTYDAEGETVGEAQTVQVALEGVREASREFVGPLSQLPPPFS
AKKINGVPAYKLARKNVEVELKPSAIEVFQFEVFEGSAPDRIGFRAHVSSGTYIRSLAHD
LGQKLGCGAHLASLRRTTVAEFTIDQAHTLEAVETAVAKGNPEELFVHPRRILPQLPCVT
ANDETVAYIRNGRAVNLPEFSKAKLVKVFAGQAEIVCVAQRIAGTLFHPKLVMPANQLIA
TK
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgcccctcgacgcagttctcgtcatcgacaagcccgcaggctggacctcgcacgacgtg
gtcgcgcggttgcgccgcgtgctttccgagcgctcggccgggcatctgggtactttggat
ccgatggcgaccggcgttttgcccgtggttctcgggcgctacacccgcctttcccagttc
tacaaccattctgagaagtcgtacgaaggcgaaatccgattcggctttgcgaccaacacc
tacgacgcggaaggggagaccgtaggagaggcgcagacagttcaagtggcacttgaaggc
gtgcgtgaggcgagcagggaattcgtagggccactttcgcagcttccaccacccttctcg
gcgaagaaaattaatggcgttcccgcttacaaattggctcgcaagaacgttgaagtagaa
cttaaacctagcgcgatcgaagtctttcagttcgaggtcttcgaaggctctgctcccgac
cgcatcggctttcgggcgcacgtgtcgtctggtacctatatccgctcactcgcccatgat
cttgggcaaaagctcggttgcggcgcccacctcgctagcttgcggcggacaaccgtcgca
gagttcacgattgaccaggcacacacgttggaagcggtggaaacggccgtggcaaaaggg
aatccggaggagttgttcgtccacccacgccgcattctgccgcagctgccgtgcgtcacc
gcgaacgacgagaccgtcgcttacatccgcaatgggcgcgccgtgaatctgccggagttt
tccaaggcgaagctggtgaaggtgttcgccggtcaggcggagattgtgtgcgtggcacaa
cggatcgccgggacgctgtttcatcccaagctggtgatgccggcgaatcaactcatcgcg
acgaagtag
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