Candidatus Koribacter versatilis: Acid345_2858
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Entry
Acid345_2858 CDS
T00352
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
aba
Candidatus Koribacter versatilis
Pathway
aba00061
Fatty acid biosynthesis
aba00071
Fatty acid degradation
aba01100
Metabolic pathways
aba01212
Fatty acid metabolism
aba02024
Quorum sensing
aba04146
Peroxisome
Module
aba_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
aba00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Acid345_2858
00071 Fatty acid degradation
Acid345_2858
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Acid345_2858
09145 Cellular community - prokaryotes
02024 Quorum sensing
Acid345_2858
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
aba01004
]
Acid345_2858
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aba04147
]
Acid345_2858
Enzymes [BR:
aba01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Acid345_2858
Lipid biosynthesis proteins [BR:
aba01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Acid345_2858
Exosome [BR:
aba04147
]
Exosomal proteins
Exosomal proteins of breast milk
Acid345_2858
Exosomal proteins of breast cancer cells
Acid345_2858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Acyltransferase
PP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABF41859
UniProt:
Q1IMP1
LinkDB
All DBs
Position
3400408..3403164
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AA seq
918 aa
AA seq
DB search
MFYARFIETVESWPDAIALEMQRAPTAADPTPAVESYTYTQLRAIAESVGAWIASRGISG
GARCAFLAANSPLWTATYIGVVSSGNTAVPLDTAYKPEQLRKLLLDCGAVLLFVDDRNLD
HARAAIEGLKIELAMISGAAVAPELPNLDQMIGRGSQGFQPIIAAAEDTICILYTSGTTS
DPKGVMLTHGNLVAEMDGALGIIDVDHRDALLGVLPLFHALAQMANLLIPLAIGARVVYL
DSLNTSELLRALRERKITIFCCVPQFFYLIHERVQKQVAEKGKLTQNIFKLMMGTSRVAR
RFGLNPGKIFFGKVHELLGKQMRYLITGGSRFDLTIGRDLHAMGFNILQAYGLTETSGGA
CVTPPKHNVIGSIGKPFVGAEIEIHDPKPDENGRPVGELKIRGGMVMKGYYNRPDATAAV
LRDGWFYSGDLGYKDTQGNLYISGRAKEIIVLSSGKNIYPEEIEAHYLKSPFIKELCVMG
LESKPGEPMGERLHAAVVPNFDVLKEKKIVNVREVIRFDIESLSAQQPSTKRILSYDIWQ
EDLPRTTTRKLKRFEIEKRTREMHARGEQQQDAPVVREITAEEREWLDRPEVQQALAIIR
THATKAKAELQPSDNLELDLGLDSMERVEMLVEIEQALGADVPDSVSGEIYSVRELVDAV
LAHRGTGGRKQIGWDAIFAEPVTNPEVLAVANERPIAARFWYAIGRVANLASRDLFHLKI
TGLEKLPKSGPFIISPNHQSFLDAPVLMANMRWSLFRNLFFVGTSEIWGDGLARKLASTM
RLIPIDPDANLVPAMQAAAFGLKAGRTLVLYPEGERSIDGPPKTFKKGAAILAAHLQVPI
YPIAIEGFHEAWPRGKGFQKFARLQVAVCDPVVPPPGPPTPETYERLTAELREKIVREWE
RMSGRKDPRAQQSPVNVG
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgttctacgcccgcttcatcgagacggtagaaagctggccggacgccattgcgctcgag
atgcagcgcgcaccgactgccgccgatcctaccccggcggtcgagagctacacttacaca
caattgagggccatcgcggagtcggtgggagcgtggattgcgagccgcggcatctctggc
ggggcgcgctgcgcattcctggccgcgaattccccgctctggaccgcgacttacatcggg
gtggtctcctccgggaacaccgctgttccgctcgacaccgcctataaaccggagcagctt
cgcaagctgctgctcgactgcggcgccgtgctgctgttcgtggacgatcgcaatctcgac
cacgcgcgggcggcgatagaaggtctgaagattgaactggcaatgatctcgggcgctgcc
gttgcgccagagttgccgaacctcgaccagatgatcgggcgcggatcgcagggatttcag
ccgattatcgcggcggccgaagatacgatttgcatcctgtacacctcgggcacgaccagc
gatcccaagggcgtgatgctgacgcatggcaacctcgtcgcggaaatggacggcgcgctg
ggcatcattgacgtggaccatcgcgacgctttgctgggtgtgctgcctctcttccatgca
ctggcacagatggcgaatttgctgatccccctggcgatcggggcccgcgtggtgtatctc
gactcgctgaatacatcggagctgctgcgagcactgcgcgagcggaagatcacgatcttc
tgttgcgtaccgcagttcttctacttgatccacgaacgcgtgcagaagcaggtggcggaa
aaaggcaagctcacccagaacatattcaagctgatgatggggacttcgcgagtcgcgcga
cggttcgggttgaatcccgggaagattttcttcggcaaagtgcacgagctgcttgggaag
cagatgcgctacctcattaccggcggctcgcgtttcgatctcacgattggccgcgatctg
cacgccatgggtttcaacatcctgcaggcatatgggctgacggagaccagtggcggcgct
tgcgttactccgccgaagcacaacgtgatcggatctatcggaaagccgtttgtgggcgct
gagattgagattcatgatccgaaacctgacgaaaacggccgcccggtgggagaactgaaa
atccgcggtggcatggtgatgaagggctactacaaccggcccgacgccacggctgccgtg
ctgcgcgatggctggttctactccggcgatctcggctacaaggacacgcagggaaacctg
tacatatccggtcgcgcgaaggaaatcatcgttctcagttccggcaagaacatctatccg
gaggagatcgaagcgcactacttgaagtcgccgttcatcaaggaactctgcgtgatgggt
ctggaaagcaagcccggcgagccgatgggcgagcggttgcacgcggccgtagtgccaaac
ttcgacgtcctcaaggagaagaagatcgtcaacgtgcgcgaagtgatccgcttcgatatc
gaaagcctctccgcacaacagccgagtaccaagcgcattctgagctacgacatttggcag
gaagatcttcctcgcaccaccacgcggaagctgaagcgattcgaaatcgagaagcgcacc
cgagagatgcacgcacgcggcgagcagcagcaggacgcgccggtggtgcgggaaatcacc
gccgaagaacgcgagtggctggaccgtcctgaagtacagcaagcgctggccattatccgg
acccacgctaccaaggccaaagcagagttgcaacctagcgacaacctggaactcgacctc
gggctcgattccatggaacgggtggagatgctggtcgaaatcgagcaggcgctcggcgcg
gatgttcccgactccgtcagcggcgagatttactccgtccgcgaactggtagacgcggtg
ctcgctcatcgcggtactggcggacggaaacagattggatgggacgcgatcttcgcggag
ccagttacgaatccggaagttctcgccgtcgccaacgagcggccgatcgcggcacgtttc
tggtatgcaattggccgggtggcgaaccttgcctcgcgcgatctcttccacttgaagatc
accggcttagaaaagctgccgaagtcgggaccgttcatcatctcgccgaaccatcagagt
tttctcgatgcgccggtgctgatggcgaacatgcgctggtcgctattccgcaatttgttt
ttcgtcggtaccagcgaaatttggggcgatggccttgctcggaaactagcctcgacgatg
cgactgattcccatcgatcccgacgccaatctcgttccagccatgcaggcggcggcgttc
ggtcttaaggccgggcgcaccctggttctctatcccgaaggcgagcgcagcattgatggc
ccgccgaagaccttcaaaaagggcgcggccatcctcgcagcgcacctccaagtgcccatc
tatcccatcgcgatcgaaggctttcacgaggcgtggccgcgtgggaagggcttccagaag
ttcgcgaggctacaggtcgcggtgtgcgatccggtcgtcccacctcccgggccgccgacg
cccgagacctacgaacgtcttacggcggaattacgcgagaagatcgttcgcgagtgggag
cgcatgagcggacggaaagatccgcgcgcccagcaaagccctgtaaatgttgggtag
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