Candidatus Koribacter versatilis: Acid345_2969
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Entry
Acid345_2969 CDS
T00352
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
aba
Candidatus Koribacter versatilis
Pathway
aba00061
Fatty acid biosynthesis
aba00071
Fatty acid degradation
aba01100
Metabolic pathways
aba01212
Fatty acid metabolism
aba02024
Quorum sensing
aba04146
Peroxisome
Module
aba_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
aba00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Acid345_2969
00071 Fatty acid degradation
Acid345_2969
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Acid345_2969
09145 Cellular community - prokaryotes
02024 Quorum sensing
Acid345_2969
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
aba01004
]
Acid345_2969
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aba04147
]
Acid345_2969
Enzymes [BR:
aba01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Acid345_2969
Lipid biosynthesis proteins [BR:
aba01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Acid345_2969
Exosome [BR:
aba04147
]
Exosomal proteins
Exosomal proteins of breast milk
Acid345_2969
Exosomal proteins of breast cancer cells
Acid345_2969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Acyltransferase
PP-binding
AMP-binding_C
AMP-binding_C_3
DUF1493
Deltaretro_Tax
Motif
Other DBs
NCBI-ProteinID:
ABF41970
UniProt:
Q1IMD0
LinkDB
All DBs
Position
complement(3514698..3517262)
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AA seq
854 aa
AA seq
DB search
MPSESIADFVPAFLKLGRETAFVHRRGYRTVRWTYAEVAALAYRFARELDARQIARGQRV
LLWGESGPEWVAVFLGCALRGVVVVPMDQIAAPEFAERVAAEVELPLAVVSRDIRPGPVV
AVLPRLVLDDLSDTLAGRSGDAYAPTESAAGDPLEIVFTSGTTAEPKGVVLSHGNVVSNL
APIAREIEKYRKYERWFHPLRFMNALPLSHVFGQFLGIFIPHLLGATVFFPDSLNPGELI
KTIKRERISVLIAVPRVLQSLKEKIERDFEAIGELEKFRREWAAADGKHFGVRWWRMRRV
HNLFGWKFWAFISGGAALDAETEEFWRRMSFGVVQGYGLTETTSLISLNHPFSIGKKSIG
KVLPGREVKLAEDGEILVRGAGVASGYWQGREVRAVGDAEGWFRTGDLGALDEQGNLYFK
GRKKDVIVTPAGLNIYPADLEAALRAQPEVKDCVVIGLARGGNDEPCAVLLLQDRAQDPA
AMMARANAGLADFQQMRAWFVWPDEDFPRTPTQKPRVNVVKDAVLRAQTPGNAADDGTLG
DLITRITGRRADLRPDARLEDDLRLSSLDRVELLSAIEDRYQVDLSDSSLSSATTVGDLE
KLLQAPAPKPVERPFPRWAQTVAPVRWVRNLVYSTVTWPYTAIMAKPTVVGRENLEKYAG
PLLIVCNHVTYIDLGFVMYALPMRLRYRIATGMLGERLWAMRAGQSSGHRELNAPMSLSP
GNLLRRWLNKLDYYLVLALFNVFPLPQQSGVRESFEFAGESADRGFSILVFPEGRRSETG
ELGEFRSGVGMLAQRLNLPVLPIRIDGLKNLGIAKRHWARKGEIVVRVGTPIVFDAGMTA
DEITQGIRDAVKGL
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgccctctgaatccatagcagactttgtaccggcattcctgaaactcggacgcgagacc
gcgttcgtgcatcggcgcggctaccgcaccgtgcgctggacgtacgctgaagtggcggca
ttggcgtatcggtttgcgcgggaactcgacgcgcggcagatcgcgcgcgggcaacgcgtg
ttgctgtggggcgagagcgggccggaatgggtggctgtgtttcttggatgcgcgctgcgc
ggcgtggtcgtggtgccgatggaccagattgcggcgccggagtttgcggagcgcgtagcc
gccgaggttgaactgccattagcggtggtatcgcgcgatattcggccggggccagtggta
gcggtgctgccgcggttggttctggacgatctgagcgacacgcttgccgggcgctcgggc
gacgcgtacgcgccgacggagagcgcggccggggatccgctagaaattgtgtttacgtcg
gggaccacggcggagccgaagggcgtggtgctctcgcacgggaacgtggtgtcgaacctg
gcgccgatcgcgcgggagatcgagaaatataggaaatacgagcgctggttccatccactg
cgctttatgaatgcgctgccgctgagccatgtgtttgggcaatttctggggatattcatt
ccacatttgctgggtgcgacggttttctttcccgattcgctgaatccgggcgagctaatt
aagacgatcaagcgggagcggatcagcgtcttaatcgcggtgccgcgggtgttgcagtct
ctgaaagagaagatcgagcgcgacttcgaggcgattggggaactggaaaagttccggcgc
gagtgggcggccgcggatgggaagcattttggggtgcgctggtggcggatgcggcgcgtc
cacaacctatttggatggaagttctgggcgtttatctcgggtggcgcggcgctggacgcg
gaaaccgaggaattttggcgtcggatgagctttggcgtggtgcagggctacggtctgacg
gaaacgacatcgctaatcagcctgaaccatccgttttcgattggaaaaaagtcgattggc
aaagtgctgccggggcgtgaggtgaaactcgccgaagatggcgagattctggtgcgcggt
gcgggcgtggcgagcgggtattggcaaggacgcgaagtccgcgcggttggcgacgcggaa
ggctggttccggaccggagatcttggcgcgctcgacgagcagggaaacctctatttcaaa
ggccgtaagaaagatgtgatcgtcacgccggcggggttgaacatctacccggcggatttg
gaggcggcgctgcgcgcgcagcctgaggtgaaagattgcgtggtgattgggctggcgcgt
ggtggaaacgacgagccgtgcgcggttttgctgctgcaggaccgcgcgcaggacccggcg
gcgatgatggcgcgggcgaacgcgggtctggcggatttccagcagatgcgcgcgtggttt
gtatggccggacgaggattttccgcgcacaccgacgcagaaaccgcgagtgaacgtggtg
aaagacgcggttttgcgcgcgcaaacgccgggaaacgcggcggatgacggtactttaggc
gatttgatcacgcgaatcacgggccggcgcgcggatttgcgtccggatgcgcggctggaa
gacgatttgcgcctcagttcgctggatcgcgtggagcttttgagcgccatcgaggaccgc
taccaggtggatctgagcgattccagcctgtcttctgcgaccaccgtgggggacctggaa
aaactgctgcaggcaccggcgccaaagccggtggaacggccatttccacggtgggcgcag
acggtggcgccggtgcgttgggtgcgcaatctggtgtattcgacggtgacttggccgtac
acggcgatcatggcgaagccgaccgtggtcgggcgcgagaatctggagaaatacgcgggg
ccgctgctgattgtgtgcaatcacgtgacgtacatcgacctgggcttcgtgatgtacgcg
ctgccgatgcggctgcggtatcgcattgcgacgggaatgctcggcgagcggctgtgggcg
atgcgggcgggacagtcgagtgggcatcgcgaactgaatgcgccgatgagcttgtcgccg
ggaaatctgctgaggcgatggctgaataagctggattattacctcgtgctggcgctgttt
aacgtctttccattgccgcaacaatctggcgttcgcgagagctttgagtttgcgggtgag
tcggcggatcgcgggttcagcattcttgttttcccagagggccgccgatcggaaaccggt
gagttgggcgagtttcgctcgggcgtagggatgctggcgcaacggttgaatctaccggtg
ttgccgatccggattgacgggctgaagaacctgggtatagccaagagacattgggcgcgg
aagggcgagattgtggtgcgagtgggcacgccgattgtgtttgacgctggtatgacggcg
gatgagattacgcaggggatcagagacgcggtgaaagggttgtga
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