KEGG   Candidatus Koribacter versatilis: Acid345_3035
Entry
Acid345_3035      CDS       T00352                                 
Name
(GenBank) signal recognition particle subunit FFH/SRP54 (srp54)
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
aba  Candidatus Koribacter versatilis
Pathway
aba02024  Quorum sensing
aba03060  Protein export
aba03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:aba00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Acid345_3035
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Acid345_3035
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Acid345_3035
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:aba02044]
    Acid345_3035
Enzymes [BR:aba01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Acid345_3035
Secretion system [BR:aba02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Acid345_3035
  Eukaryotic Sec-SRP protein
   Acid345_3035
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin AAA_22 CbiA AAA_30 AAA_33 6PF2K ArsA_ATPase AAA_31 AAA_18 cobW AAA_17 AAA_19 APS_kinase AAA_16 nSTAND3 ParA NACHT Thymidylate_kin VirC1 NPHP3_N
Other DBs
NCBI-ProteinID: ABF42036
UniProt: Q1IM64
LinkDB
Position
3601689..3603053
AA seq 454 aa
MFDNLSDKLQRAFKSLRGQGKLTPENMEEALREIRLALLEADVNFKVVKEVVDRIQYKAL
GEDVMTALSPAEQVVKIVRDELIAILGKDTAKVKFASQPPTIILMAGLQGSGKTTTSGKL
AHWLKNGGHRPMLVSVDVYRPAAREQLKVVAQAINAKLYEGKVEEANTDTVVRLAKEARR
EAISNGCNILIVDTAGRLHIDDQLMDEMQHLKTLLNPQEILFVADAMTGQDAVNSAKEFH
DKLTLTGVVLTKMDGDARGGAALSIRQVTGQPIKFIGVGEKYDALEPFHPDRIVGRILGM
GDVLSLIEKAEASIDKKKSEEFASKALSGDGFSLADFRDQLKQVKKLGSLQSIIGMLPRI
GPFAGLQQVADKVDDKELSRVEAIINSMTPHEREHHDVINGSRRKRIANGSGTSVQEVNQ
LLRQYSQMRKMFKTMSKPSFAKRLSGMKMPNGMQ
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgtttgacaatctttccgacaagctccagcgagcgttcaagtccctgcgtggccagggc
aaactcaccccagaaaacatggaagaggcgctgcgcgaaattcgtctcgcgctcctcgaa
gccgacgtcaactttaaagtcgtaaaagaagtagttgaccgtatccagtacaaagcgctc
ggtgaagatgtaatgaccgcgctttcgcccgccgagcaggtcgttaagatcgtccgcgac
gaactcatagctatcctcggcaaagacactgccaaggtgaagttcgcttcgcagccgccg
accatcattctcatggccggcctccagggttccggtaagaccacgacctccggaaagctc
gcgcattggttgaagaatggcggccatcgccccatgctggtttcggttgacgtctaccgc
cccgcggcccgcgagcaacttaaagtagtggctcaagctatcaacgctaagctctacgaa
ggcaaggttgaggaagcgaacacggataccgtcgttcgcctcgccaaagaagcccgtcgc
gaggccatcagcaacggctgcaacatcctcatcgtcgataccgctggccgtctccacatt
gacgaccagctcatggacgagatgcagcacctcaagacgctgctcaatccgcaggaaatc
ctgttcgtcgccgacgccatgaccggccaggacgccgtcaactccgccaaggaattccac
gacaagctgaccctcaccggcgtggtcctcaccaagatggacggcgacgctcgtggcggc
gctgcgctctccatccgccaggtcaccggccagcccatcaagttcatcggcgtcggtgaa
aagtacgacgctctcgaacccttccaccccgaccgcatcgtcggccgcatcctcggcatg
ggcgacgtcctctcgctgatcgagaaggccgaagccagcatcgacaaaaagaagtcggaa
gagttcgccagcaaggcgctcagcggcgacggcttctcactcgccgacttccgcgatcaa
cttaaacaggttaagaaactcggatcactccagtcgatcatcggcatgctgccgcgcatc
ggtcccttcgccggcctccagcaagtcgccgacaaggtggacgacaaagagctctctcgc
gtggaagccatcatcaactccatgacgccccatgagcgcgagcatcacgacgtgatcaac
ggaagccgccgcaaacgcatcgcgaatggctccggtaccagcgtgcaggaagtgaaccag
ctcctccgccagtactcgcaaatgcgcaaaatgttcaagaccatgtcgaagcccagcttc
gccaagcggctgagcgggatgaagatgccgaacggaatgcagtag

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