Candidatus Koribacter versatilis: Acid345_3622
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Entry
Acid345_3622 CDS
T00352
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, subunit A
Organism
aba
Candidatus Koribacter versatilis
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
DEAD
AAA_22
RNA12
Motif
Other DBs
NCBI-ProteinID:
ABF42623
UniProt:
Q1IKH7
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Position
4285579..4288986
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AA seq
1135 aa
AA seq
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MKSNARLQLQIAPDADERAKVLDATRSFIVQAPAGSGKTELLMQRYLTLLAHESVTTPES
VLAITFTRKAAAEMRNRVLKALESANGPAPESAHALLSWELARKVMARDRAMGWNILQNP
EQLEIRTVDSFCEKIANRTPLLAGLGRSPAIAEDFEPLYSEAAQRTLLMLGDEKAETREA
MSQVLADQDNSFDRVQGLIVELLKRREQWGRLIGGAYQRSEEELNATRQELERALRDAIA
HELEGIRQQLLEGVPAHVLQELLDTARYGAGNLEPEHALNPLRDVNQLPGASPDDLPQWL
ALVHFCLSKDRDLRKPGGYNVNMGFPADSMHRERKDACHRLIEAIGNNDYAGTLCAALSR
VAKLPPPRYDDDQWNTLKALFRVLPLAVGHLRTVFAERGEVDFSEIALAAKAALGEEGHP
TDLALHLGYKIQHLLVDEFQDTSLSQAVLLERLIQAWSPEMGATMFVVGDPMQSIYGFRQ
AEVTLFTRSWNSGFAQMPLEQARLTANFRSRPELVTWFNQTFEHVLVADNEVTGAVKYAP
SEAAREPSQNAGPGFHSVASKAFEEEAARVIEVLQQELKGDAKSIALLVRSRSHMAHIAP
ALREAGIAFRSKEIDVLGERQTVRDLHAMTKALVNLADRTAWLTVLRGPWSGLQLEDLWT
LCKDGERKTVWELLRERRGMLSDRAQKVLARTMPALDAAVTQRGRTSLRALVESLWVSLG
GPAALGRTERKAKLRDVEAYLDLLQRVESCGEVDEKRLEQEISRLYTRPDASSEIRVEVM
TIHGAKGLEFDVVILPGLNRWIRSEGGQLLNWRERIIGEERDLLLAPMDAVGTDRKKEGS
IANYLAMLGGECSAEETKRLLYVAATRAKERLHLVTTMPAENKEPERGSLLSLLPAEVFG
RFLKVPTPEAEDEEEQRTPNLSHRLVPDWQLPAAPEPLKFETRYPVAADVREREHTFERV
QFDLPRIGTVTHRFLQQIGDEGPGGWTEERIAKTAPRIRALLLQQGIRSSELAKWEETVT
RALRNTLAHDKGQWILKQRESASNEYGLTSALDGPRRSIKVDRTFVEGEVRWLIDYKTSD
QEGTVTEKYLQEQVDKYRDDLAHYARVLRAMDGREVKGGLYFPLLQIWREVDVQS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtaacgcgcgcctccagctgcaaattgcgcccgatgccgacgagcgcgccaag
gtgctcgacgcaacgcggtccttcatcgtgcaagccccggcgggctcaggcaagaccgag
ctgttgatgcagcgctatctcacgcttcttgcgcacgagagtgtcacaaccccagagagc
gtgctggcgatcaccttcacgcgcaaagcagcggcggagatgcgcaaccgcgttttgaag
gcgctcgagagcgccaacggacctgcgccggagagcgcccacgccttactgtcttgggaa
ttggcgcgcaaggtgatggcgcgcgatcgtgcgatggggtggaacatcctgcaaaacccc
gagcagttagagatccggacggtagattcgttttgcgagaagatcgcgaaccgcacgccg
ctgcttgccggcctcgggcgctcgccggccatcgcggaagatttcgaacccttgtattcc
gaagcagctcagcgaacgctcctgatgctcggcgacgaaaaggccgagacccgcgaggca
atgtcccaagttctggccgaccaggacaacagcttcgaccgagtgcagggcctgattgtc
gagctcctgaaacgaagagagcaatgggggcggctgattggcggggcataccaacgttcg
gaagaagagctgaatgctacgcggcaggagttggagagggcattacgcgacgccatcgcg
cacgagttggagggaatacggcagcagctcttagagggtgtgccggcccacgttttacag
gaattgctggacaccgcgcgttatggagctggaaatctggagcctgaacacgcgctcaat
ccgctgcgtgacgtgaaccaactcccgggcgcgtcgcccgacgatcttccgcaatggttg
gccctggtgcacttctgcctgagcaaagacagggatctccgcaagccgggcggttacaac
gtgaatatgggtttcccggcagactccatgcaccgggagcgcaaagatgcatgccatcgc
ctgatcgaggcgattggcaacaacgactatgcgggcacgctatgcgcggccttgtctcgt
gttgcgaagcttcctcccccacgctacgacgacgaccagtggaacaccctgaaggccctg
ttccgggtcctgccgctggcggtaggacatttgcggacggtgttcgcggagcgcggcgag
gtagatttttcagaaatcgccctcgcggcgaaggcagcgcttggcgaagaaggacatccc
accgacctggcgttgcacctgggatacaagatccagcacctgctggtagatgagttccag
gacacttccctctcacaggcggtgttgttggagcggttaatccaggcttggtcgccggag
atgggcgcaacgatgttcgtggtcggcgacccgatgcagtcgatttacggctttcgccaa
gccgaggtcacactgtttacgcgcagctggaatagcggcttcgcgcagatgcccctggaa
caggcgcggctgacggccaacttccggtcgcgtccggagctggtcacctggttcaaccag
acctttgaacacgtcctggtagcggacaacgaagtcaccggcgccgtgaagtatgccccc
tccgaggccgcgcgggagccatcgcagaatgcaggacctgggtttcactcggtcgcttca
aaagcgttcgaagaagaggcagcacgggtcatcgaggtcctccagcaggaactcaagggc
gacgcgaagtcgattgcactcctcgtgcgatcgcggtcgcatatggcgcacatcgcgccc
gcccttcgcgaggcaggcattgcgttccgttcgaaagagattgatgtgctgggagaacgg
cagacggtacgggatctgcacgcgatgaccaaggcgctggtgaacctggccgaccgcacg
gcgtggctgacggtactgcgtggcccgtggagcggcctacaacttgaggacctgtggacg
ctgtgcaaggatggcgagaggaagacggtctgggaactattgcgggagcgtcgcggcatg
ctcagcgaccgagctcagaaggtgctggctcggacgatgccggccctggatgcagcggtg
acgcagcgcggacgaacgtcgttgcgggcgctggtggaatcgttatgggtttcgcttggt
ggacccgcggcgctgggacggacggaacggaaggcgaagctgcgcgatgtggaagcgtat
ctcgacctgctgcagagagtggagagctgcggcgaagtggacgaaaaacgcttggagcag
gaaatctcaaggctctacacgcgcccagatgccagtagcgagattcgcgtggaggtgatg
acgatccacggcgcgaagggtttggagttcgacgtcgtcattctcccgggattgaatcga
tggatccgcagtgaaggcggacagttgctgaactggcgggagcgcataatcggcgaagaa
cgcgacctactgctcgcgcccatggacgccgtgggcacggatcgaaaaaaggaagggagc
atcgccaactatctcgcgatgctgggcggcgagtgttccgcggaagaaaccaagcgactg
ctctatgtcgcagcgacgcgcgcgaaggaacgcctgcacctggtgacgacgatgcctgcg
gaaaataaggaaccggagcgcggaagcctgttgtcgctgcttccggctgaggttttcggc
aggttcctcaaggttcccacccctgaagcggaggacgaggaggaacagcgcactcccaat
ctctcgcaccgccttgtacccgattggcaattgcccgctgcaccggagccgctaaagttc
gagacgcggtatccagtggcggcggacgtacgtgagcgcgagcataccttcgagcgcgtg
caattcgatttgccgcgcattggcacggtcacgcaccgcttcctgcagcaaattggcgat
gaagggccggggggatggaccgaagagcgcatcgcgaagacggcgccgcgcattcgcgcg
ctgctgttgcagcaagggattcgttcatcggagctggcgaagtgggaggagacggtgact
cgcgcgctgcgcaatactctggcgcatgacaaggggcagtggatcctgaaacagcgggaa
tcggcgagcaatgagtacgggctgacgtcggcgctcgacgggccgcggcgcagcatcaaa
gtagatcgcaccttcgtcgagggcgaagtgcgctggttgattgactacaagacgagcgac
caggaaggcaccgtgaccgagaaatatctgcaagaacaggtcgacaagtaccgcgacgac
ctggcgcactacgcgagggtgctgcgcgcgatggacggccgcgaggtaaaaggcggcctc
tacttccctcttttgcaaatctggcgcgaggtggacgttcaaagctag
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