Candidatus Koribacter versatilis: Acid345_3631
Help
Entry
Acid345_3631 CDS
T00352
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
aba
Candidatus Koribacter versatilis
Pathway
aba00470
D-Amino acid metabolism
aba00550
Peptidoglycan biosynthesis
aba01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aba00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Acid345_3631
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Acid345_3631
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aba01011
]
Acid345_3631
Enzymes [BR:
aba01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Acid345_3631
Peptidoglycan biosynthesis and degradation proteins [BR:
aba01011
]
Precursor biosynthesis
Amino acid ligase
Acid345_3631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
NAD_binding_7
MurD_N
Mur_ligase
Pyr_redox
2-Hacid_dh_C
XdhC_C
AlaDh_PNT_C
Pyr_redox_3
KARI_N
DAO
AdoHcyase_NAD
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
ABF42632
UniProt:
Q1IKG8
LinkDB
All DBs
Position
complement(4298946..4300307)
Genome browser
AA seq
453 aa
AA seq
DB search
MDVRGKRVLVVGLGKSGIASATFLQAQGAKVTVSDSKSEAQLRQEIPLLLDKGITVETGH
HGERTFRDQDLIVISPGVPFDQPQLEQARKQGIPVIGEIELAAQFVPGHVIAITGSNGKT
TTTSLCGDILQSGGKKTLVGGNIGTPAISFAQLANDDTWSVLEISSFQLETIERFRPEIA
AILNITPDHLDRHGTFEKYAAAKERIFENQREHDFAILNADNEPCVEIAKRVKSQVLWFS
RQHEVKHGTFVREDKIYFRDPKGEREIMPVADMLLKGAHNVENVLAAVCVGVAASVAPEQ
IRKAVSQFKAVEHRLEYTATVKGVDYYNDSKATNVDATIKALESFSKGVHLILGGKDKGS
PYTVLNDLLHERAKTVYTIGAAAAKIEAEVKGVEVVHAETLENAVKLASQKAVKGDVVLL
APACASFDQFQSYEHRGRIFKELVRKMAEQEKK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggacgttcgagggaagcgcgtactggttgtcgggttagggaagtcgggcattgcgtcg
gcaacgttcttgcaggcacaaggcgcgaaggtgactgtttcggattcgaagtcggaagcg
cagcttcgccaggaaattccgctccttctcgacaaaggcatcacggtcgaaaccggccat
cacggcgagcgtactttccgcgaccaggacttgatcgtcatcagccccggtgttccgttc
gatcagccgcaactcgagcaggcccgcaagcagggaattcccgtcatcggcgagatcgaa
ctcgcggcccagtttgttcccggtcacgtcatagccatcaccggctccaacggcaagacg
accacgacctctctctgcggcgacattctgcaatccggcggcaagaagacgcttgtcggc
ggcaacatcggcacgccggccataagctttgcccaacttgccaatgacgacacttggagc
gtcctcgagatttccagcttccagttggagaccatcgagcgcttccgcccggaaatcgcg
gcgatcctcaacatcacgccggatcacctcgatcgccacgggaccttcgagaagtacgcc
gccgccaaggaacgcattttcgaaaatcagcgcgagcacgacttcgccatcctcaacgcc
gacaacgaaccgtgcgttgagatcgccaagcgcgtgaagtcgcaggtgctctggttctcg
cggcagcacgaagtgaagcacggcaccttcgtccgcgaagacaagatctacttccgcgat
cccaaaggcgagcgcgagatcatgccggttgccgacatgctgctcaaaggcgcgcacaac
gtcgagaacgttctcgccgcagtttgtgtaggcgtcgccgccagtgttgcgcccgagcag
attcgcaaagctgtctcgcagttcaaagccgtcgagcatcgcctcgaatacaccgccacc
gtcaagggcgtggactactacaacgactccaaagccaccaacgtggatgcgaccatcaag
gccctcgagtccttcagcaagggtgtgcacctcatcctcggcggcaaagacaaaggcagc
ccctacaccgtgctcaacgatctcctccacgagcgcgccaagaccgtgtacaccatcggc
gcagcggcagcgaagatcgaagccgaagtaaaaggtgtggaagtcgtccacgccgagacc
ctcgaaaacgccgtgaagcttgcgtcgcaaaaagcggtgaagggcgacgttgtcctgctc
gcgcctgcctgcgccagcttcgaccagttccagagctacgagcatcgcggacgcatcttc
aaagagctcgtccgcaagatggcagagcaggagaagaagtag
DBGET
integrated database retrieval system
