Candidatus Koribacter versatilis: Acid345_3727
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Entry
Acid345_3727 CDS
T00352
Name
(GenBank) DNA-binding protein Fis
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
aba
Candidatus Koribacter versatilis
Brite
KEGG Orthology (KO) [BR:
aba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aba03000
]
Acid345_3727
Transcription factors [BR:
aba03000
]
Prokaryotic type
Helix-turn-helix
Other families
Acid345_3727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
Mg_chelatase
HTH_8
HTH_50
AAA_16
nSTAND3
Parvo_NS1
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
ABF42728
UniProt:
Q1IK72
LinkDB
All DBs
Position
complement(4404309..4405337)
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AA seq
342 aa
AA seq
DB search
MESDNEVRSNGQRPVERRFEQIIGKSPALESAFADVEQVAPTDSTVLILGETGTGKELIA
RAIHNISPRCGRPFVKLNCAAIPFDLLESELFGHEKGAFTGAIAQKIGRFDMANTGTLFL
DEIGDIPLALQPKLLRVLQEQEFERLGSCRTHRVDVRLVAATHRNLIEMVKRAEFRSDLY
YRLNVFPVTLPALRERKEDIPLLVAHFVKVFGQRMGKRILNVPQSTMDALTEYSWPGNIR
ELQNLVERAVIRSNDGLLPNPLPQSANYQHNQFTQGVFADSQREVILKMLDTCGWILGGS
RGAASRLGLKRTTLIAKMKKLGISRPLSESDRPQLTEQQESD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
gtggaatcggacaacgaggttcgatcaaatgggcagcgcccggtcgaacgcagatttgaa
caaatcataggcaaaagtcccgcgttggaatcagcatttgcggacgtggaacaggtagcc
ccgactgattccactgtgctgatcctgggggagaccgggacaggtaaggagttgattgct
cgagctattcacaatatcagtcctcgctgcggacgtccgtttgtaaagctgaattgcgct
gctattccattcgaccttttagaaagtgagcttttcggccacgaaaaaggtgctttcacc
ggagcgatcgcgcagaagattggacgtttcgacatggcaaacacggggacgctcttcttg
gatgaaataggagacattcccctggcgttacagcctaagctcctgcgtgtgctacaggag
caggaattcgagaggctaggaagttgccgtacccatcgcgttgatgtgcgcttagtcgct
gccactcatcgcaatttgatagaaatggttaaacgggctgaattccgcagtgatctctat
tatcgtctgaatgtttttcctgtcactctcccagctctcagggaacgcaaggaggacatc
cccctacttgtcgctcattttgttaaggtttttgggcaacgcatgggcaaacgaatcctt
aatgtcccgcagagcacgatggacgctttaacggaatattcttggcccggcaacattcga
gagctacaaaatctggtggaacgtgccgtgattcgatcgaacgacgggttgcttccgaat
ccgctacctcaatctgcgaattatcaacacaaccagttcactcagggcgtgttcgctgat
tctcagcgggaagtgatattgaaaatgttagatacgtgcggttggattctcggggggtcc
cgtggagcagccagtcggttgggactaaaacgaaccaccctaatcgcaaaaatgaaaaag
ctcgggatctcaaggcccctctccgaaagcgatagacctcaactgactgaacagcaagag
agcgattag
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