Candidatus Koribacter versatilis: Acid345_3775
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Entry
Acid345_3775 CDS
T00352
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
aba
Candidatus Koribacter versatilis
Pathway
aba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Acid345_3775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aba03400
]
Acid345_3775
Enzymes [BR:
aba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Acid345_3775
DNA repair and recombination proteins [BR:
aba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Acid345_3775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABF42775
UniProt:
Q1IK25
LinkDB
All DBs
Position
complement(4463442..4464263)
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AA seq
273 aa
AA seq
DB search
MARTLDQNALSARLEFYREMGIYGLYRRPVDATAVSENPETPDEQYLPKKKEVTVTAEKT
LNVLQPTLSKPDGLKAIREDLGDCTRCVLHKQGRKQIVFGVGNPSAELMFVGEGPGADED
EQGIPFIGRAGQLLTNMITNGMGLKREDVYIANVVKCRPPGNRTPEREECDTCSPFLFRQ
IEVIQPKMIVALGAVAAKTLLGVNEAMARLRGQIYDFSTPRRPGSDLYDGKLVVTYHPAY
LLRDPRQKSEAWKDLQIVMRYLGIPMPAKKSAE
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggcccgaaccttggatcagaatgctctgtccgctcgtctggagttctatcgcgaaatg
gggatttacggcctctatcgtcggcccgtcgatgcgacagctgtcagcgaaaatcccgaa
acgccggacgaacaatatttgcccaagaaaaaagaagtcaccgtcacagccgaaaaaacg
ttgaacgttctccagccgacgctctcgaaacccgatggcttgaaagcaatccgggaagac
cttggcgattgcacccgctgtgtgctgcataagcaggggagaaagcaaatcgtcttcggt
gtagggaacccgagtgccgagctcatgttcgttggcgaaggtccgggcgcggacgaagac
gaacagggaattcccttcatcggacgagccggccagttgctgacaaatatgatcacgaac
ggcatggggctgaaacgagaagatgtttacatcgcgaacgttgtgaagtgtcgtccgccc
ggaaatcgcactccggaacgcgaggaatgcgatacctgctcaccgttcttgttccgccag
atcgaagtcatccagccaaagatgatcgtagcccttggtgccgtggccgcgaaaacgctg
ctcggagtgaatgaggctatggcccggcttcgcgggcagatttacgatttctcgacgccc
cgccggcccggcagcgatctctacgacggcaaactggtcgtcacttaccaccccgcatac
ctgttgcgcgacccccgacagaagtcggaagcatggaaagacctccagatcgtgatgcgc
tatctcgggattcccatgccagcgaagaaatccgccgagtag
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