Candidatus Koribacter versatilis: Acid345_3782
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Entry
Acid345_3782 CDS
T00352
Name
(GenBank) Uncharacterized P-loop ATPase protein UPF0042
KO
K06958
RNase adapter protein RapZ
Organism
aba
Candidatus Koribacter versatilis
Brite
KEGG Orthology (KO) [BR:
aba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aba03019
]
Acid345_3782
Messenger RNA biogenesis [BR:
aba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Acid345_3782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
SKI
ABC_tran
nSTAND1
AAA_29
AAA_16
CoaE
Integrase_1
Motif
Other DBs
NCBI-ProteinID:
ABF42782
UniProt:
Q1IK18
LinkDB
All DBs
Position
complement(4469761..4470684)
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AA seq
307 aa
AA seq
DB search
MPLRKTKKKKVLPKSPRAPKLQPSELVIITGLSGSGKASVLKAFEDLGYYCVDNLPVDLV
PQFADLVADSPEINRAALVLDIREGQGLDRLPATLRSVRQIVKSNVVFLEADDEILLRRF
SETRRPHPLGISMPVKASIESERRRLAPIRKVADMMIDTSKFNVHELRALIFDRFGHART
QDHKKILVSCVSFGFRKGVPDDADLLFDVRFLPNPHFVPEFRPFTGRHPKVAKYIRSFPQ
TQEFINRISELLVYLLPHYISEGKSYLTIAFGCTGGQHRSVMIAEDVKKRLATAGYNVKV
VHRDSPK
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttcgcaagacaaagaagaagaaggtgttgccgaagagccctcgggcgccaaag
ctgcagccttcggaattggtgatcattaccgggttaagcggttccggtaaggcctcagtg
ctcaaagcctttgaggacctcggatattactgcgtcgacaacctgcccgtggatttggtt
ccgcagtttgctgatctggttgccgactcaccggagatcaaccgcgcagctctcgtattg
gatatccgtgagggtcaaggcctcgatcgactacccgccacgctccgctccgtccgccag
atcgtgaaatcaaatgtggttttccttgaggccgacgacgaaattcttctccgccggttc
agcgagactcgaaggccccatcccctcggaatctcgatgcccgtgaaggcgtccatcgaa
agtgagaggcggcgtcttgctccgatccggaaagtggcggacatgatgatcgacacctca
aaattcaacgttcacgaattacgggcgctgattttcgatcgcttcgggcatgcacgcact
caggatcataagaagatactggtctcatgcgtgagcttcggattccgcaaaggagtgcct
gacgatgccgacctcctgtttgatgtgcggttcctgccgaacccccactttgtacctgaa
tttcggccatttaccgggcgtcatccaaaggtcgcgaagtatattcgatcgttcccgcag
acgcaggagttcattaaccgcatctccgaacttttggtttatttgctgccgcactacatc
agcgaagggaagagctatttaaccatcgcgttcggatgtaccggcggccagcaccgctcg
gtcatgattgccgaagacgtaaagaagcgtcttgcaaccgcaggctacaacgtaaaagtc
gtgcatcgcgactcgccaaaatag
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