Candidatus Koribacter versatilis: Acid345_4294
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Entry
Acid345_4294 CDS
T00352
Name
(GenBank) metal dependent phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
aba
Candidatus Koribacter versatilis
Brite
KEGG Orthology (KO) [BR:
aba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aba03019
]
Acid345_4294
Messenger RNA biogenesis [BR:
aba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Acid345_4294
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
HD
TraI_2
RMI2
Nsp2_AV
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ABF43294
UniProt:
Q1IIK6
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All DBs
Position
complement(5101827..5102954)
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AA seq
375 aa
AA seq
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MKEFYICNCVQQENKVITSQFVVVSKQIKAKKNGEPYLALTLGDRSGSVDAKMWDNVEEF
LNAFEQDDFVKVKGLINKYNNRWQLTIHKIRKMGDSEVDFSDYLPKTSKDIDQLWAKLGE
FVETMQQPQLKQLLKLFMADEEISKAYRDAPAAKTLHHAYIGGLLDHVVSLFSSCDLIVR
NYPMVNRDLLFTGVFLHDIGKIHELTYARSFGYSTAGQLLGHMIIELEMLQKKLALIPDF
PPELKILIEHLIISHHGEYEFGSPKLPMFPEALMLHYMDDLDSKMEAMRAQFERESENES
PWTSYNSSLARPLLNSRKFLEKPNPVEEPEPAPEEKPEFETETMAATAAATEPDSVSQKS
LLDLQSHFAAKKNSI
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagttctacatctgtaattgcgtccagcaggaaaacaaagtcatcacctcgcag
ttcgtcgttgtctccaaacagatcaaggcgaagaagaacggtgagccctacctcgcgctc
accttgggcgaccgttccggttcggtggacgcgaagatgtgggacaacgtcgaggagttc
ctcaacgccttcgagcaggatgacttcgtcaaagtgaaggggctcatcaacaagtacaac
aaccgctggcagctcaccattcacaaaatccgcaagatgggcgatagcgaagtcgatttc
tccgattacttgccgaagacatccaaggacatcgatcagctctgggcgaagctcggcgaa
tttgtcgagaccatgcagcaaccgcagctcaagcagttgctaaagctgttcatggcagac
gaggaaatttcgaaagcctatcgcgacgcacccgccgccaagacgctgcatcatgcctac
atcggtggcttgctcgatcacgtcgtgtcattgttctcgagctgcgatctcatcgtgcgc
aattatccgatggtgaatcgcgacctgctcttcaccggcgtcttcctgcacgacatcggc
aagatccacgagctcacctacgcgcgttcgttcggctactctaccgccggccagctgctc
gggcacatgatcattgagctcgaaatgttgcaaaagaagctcgcgctcattccagatttt
ccgcccgaactgaagatcctgatcgagcacctcatcatcagccatcacggcgaatacgag
ttcggatcgccgaagctgccgatgttccccgaggccctcatgctccactacatggacgac
ctcgattccaaaatggaagccatgcgtgcgcagttcgagcgtgaatccgagaacgaaagc
ccgtggacgagctataacagttcgctcgcgcgcccattgcttaactcacgaaagttcctc
gagaagcccaatccggttgaagaacccgagcctgcgcccgaagaaaagccagagttcgag
acagaaacaatggccgctacggccgctgcgactgaaccggatagcgtctctcagaagagc
ctgctcgatctccagtcacactttgccgcaaagaagaattccatctag
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