Candidatus Koribacter versatilis: Acid345_4299
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Entry
Acid345_4299 CDS
T00352
Name
(GenBank) MutS2 family protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
aba
Candidatus Koribacter versatilis
Pathway
aba03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Acid345_4299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aba03400
]
Acid345_4299
DNA repair and recombination proteins [BR:
aba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Acid345_4299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
IMD
Bles03
Spectrin_SESTD1
Motif
Other DBs
NCBI-ProteinID:
ABF43299
UniProt:
Q1IIK1
LinkDB
All DBs
Position
complement(5109048..5111486)
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AA seq
812 aa
AA seq
DB search
MIPRPLTHSSAPVLEFEAFRELLRGYAQSELGSARVRELAPSADREWIEREQQLASEIRG
YIRAAGRFDFVGLTDATKLIQKARIRGAALEMDEIRTILLLAERAAEWREILISPPVMRE
PWKAVEDLSSSLADFREFLRYFSNKLLPDGSLDDRASSELHRIRREIERQKRHIQSSLQS
FLRKLSDEGTAQEELITIRGDRFVIPVKAEQKRRVNGVVHGASSSGQTVFVEPMETIEQN
NDLVRLLEEEQEEIRRILAEMSRRIGEQSENLLFALYVLAELELQFAKAKFAQEYECVAV
KFLADGGEDVLVLEKARHPLLERNLRPKGIAVVPMAMHMDARHRQIIISGPNTGGKTVSL
KTLGLLALIAQAGVPVPADRAELPIFSSVFADIGDYQSIEQNLSTFSAHVTNIDLISHTA
GADSLVLLDELGSATDPEEGAALAVAIADYFRQIGCLSVISTHHTSLKVYAANTEGVLNA
AVGFDEQTLQPTYELRVGVPGASAGINIAKRLGLNSTIIEASKRQLSNQAQDVAKFLDRL
HAELRAASDERASIKRTEEELVRERKRLEAEGQKEQREKIRDLEKKLDGLLHDFEYQARE
MVQAVQDRAAQQKLSKDAERRIAKMRREFREQFDNSVVAHATGADQGDPNARPELVKHVS
EGDRVKLRSMGREGKVIKRLGADLFEVEIGVMKMKVPREDIAEVTSRPSANPVAAARAKG
VSVSLVSDDLSSPIELNVIGQNVDDATREVERFLDKAFLAGMVQVRIVHGSGMGILRRAL
RTYLKHHPHVSNVVEPPQQEGGNGATVVELKV
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgatccctcggccactcacccactccagtgccccggtcctggaattcgaagcgtttcgc
gagttgttgcgcggctatgcgcaatcggaactcgggtcggcacgcgtccgcgaactggcg
ccgtcggccgatcgggagtggatcgagcgagaacagcaactcgcatccgagattcgaggg
tacattcgtgctgccgggcgcttcgacttcgtcggactgaccgatgcgaccaagttgatt
cagaaagcccgcatccgtggtgccgcactggagatggacgaaattcgcaccatcctgcta
ctcgcggaacgcgcagcagagtggcgcgagatcttgatttcgcctcccgtgatgcgcgag
ccttggaaggccgtggaagatctctcgagttcgctcgcggattttcgagaattcctgcgc
tacttcagcaacaaattacttccggacggatcgctcgacgatcgcgcctcaagcgagttg
catcgtattcggcgcgagatcgagcggcagaagcgacacatccagagctcgttgcaatcg
ttcctgcggaagttgtccgatgaaggcacggcgcaggaagagttgatcacgattcgcggc
gaccgcttcgttatcccggtaaaggcggagcagaagcgacgtgtgaatggcgtggtacac
ggcgccagttcaagcggccagacggtgttcgtggagcccatggagacgatcgagcaaaac
aacgacctagtgcggttgctggaagaagagcaggaagagattcggcgcattcttgccgag
atgtcgcgacgaatcggggagcagtcggaaaacctgctctttgcgctctacgtactggct
gagttggagcttcaatttgcgaaggcgaagttcgcacaagagtatgagtgcgtcgcggta
aagttcctggcggatggcggcgaggatgttctggtactcgagaaagcgcggcatccgcta
ctcgagcgtaatttgcgacccaaggggatcgcggttgtgccgatggctatgcacatggat
gctcggcaccgccagatcatcattagcggcccaaatacaggtggcaagacggtgtcgctc
aagactttgggcttgctcgcattgatcgcgcaagcaggcgtaccagttcctgcggacaga
gcggaactgccgattttcagcagtgttttcgctgacatcggcgattaccagtccatcgag
caaaacctttcgacattctcggcacacgtcacgaacatcgatctcatctcgcacaccgcc
ggagcagattccttggtgctgctggatgaacttggctctgcaacggacccggaggaaggc
gcggcactcgcggtcgccattgccgactacttccgccagatcgggtgcttaagcgtgatc
tcgacccaccatacgtcattgaaggtatacgcggccaacacggagggtgtgttaaatgcc
gccgtcggcttcgatgagcagacgctgcagccgacgtatgagttgcgtgtgggagtgccg
ggcgcctcagcgggtatcaacattgcgaagcgactcgggctcaattcgacaatcatcgaa
gcgtcgaaacgacagcttagcaatcaggcacaggatgttgcgaagttcctcgaccgcctg
catgccgagcttcgcgcagcttctgatgagcgtgcctccatcaagcgaaccgaagaggaa
ctggtgcgcgagcgcaagcggcttgaggcagaaggccaaaaagagcagcgcgagaaaatc
cgcgacctcgaaaagaagctcgacgggctgctccacgactttgagtaccaagcgcgcgag
atggtgcaggcggtgcaggaccgtgccgcacaacaaaagctgtcgaaagatgcggaacgc
cggattgcaaaaatgcgccgtgagttccgagagcagttcgacaacagtgtagtggctcac
gccaccggcgctgaccaaggcgatccgaatgcccggccggaactcgtgaaacacgtctcc
gagggtgaccgcgtaaagctgcgctccatgggccgcgaaggcaaggtgattaagcggctg
ggggctgacctgttcgaagtggaaatcggcgtgatgaagatgaaggtgccgcgcgaggac
atagcggaggttacttctcggccgagcgcgaatccagtcgcagcggcgcgtgcaaaaggt
gtaagtgtttcgctcgtgagcgacgacctatcgtcgccgatcgagttgaacgtcatcggt
cagaacgtagatgatgcgacgcgcgaggttgagcgtttcctcgacaaagcgtttcttgca
ggcatggtgcaggtgcgaattgtgcacggcagcggcatggggatcctccgccgggcgcta
cggacctacctcaagcatcatccgcacgtgtcgaacgttgtcgagcctccgcagcaagag
ggcgggaacggcgccacggtcgtcgaactcaaggtttag
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