Candidatus Koribacter versatilis: Acid345_4483
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Entry
Acid345_4483 CDS
T00352
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
aba
Candidatus Koribacter versatilis
Brite
KEGG Orthology (KO) [BR:
aba00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aba02000
]
Acid345_4483
Transporters [BR:
aba02000
]
Other transporters
Pores ion channels [TC:
1
]
Acid345_4483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarboxypepD_reg
OMP_b-brl_3
CarbopepD_reg_2
SdrD_B
SpaA
Big_1
EMC7_beta-sandw
Ig_DR_A0283-like
PEGA
Motif
Other DBs
NCBI-ProteinID:
ABF43483
UniProt:
Q1II17
LinkDB
All DBs
Position
complement(5321235..5323448)
Genome browser
AA seq
737 aa
AA seq
DB search
MRRLLLSCCLLFPAALFAGELTIHVVDPDQRPVVNANVALYSSNHSEVRTTGADGAAHFS
NVSDGSYNVQVLAPGFAKAEQPVQLPERSDSTVALSVENAAESVVVTATSSPVSEAESGS
AVSTLDAQQLTLKQATAASDALRFMPGVLVTATGQRGSLTTVNVRGGESRYNHVIVDGVP
VNEPGGQFDFGVVPTAQMDRIEVVRGSDSAVYGSDAMSSVVQMFSATGTTRTPEFRFGAD
GGNFGTAHGFLSIAGAWRRFDYNLFGDQFNTNGQGLNNAYSNGLEGLNLGYRVNQRAQLR
FRLRHANSWSGTSNEWWFNGDAALPADSDQYARQTNFLADLDLTIAGPGAWQHRFSGFEY
NHDRRNVDSFVDPGRPADFDQPFDSAALYNRAGFDWQSDYSPRSWTRTSIGYHFEKENGN
ITSNYSFFGFPEYSVTIGQRNNQAVFGQQMLLWKRFSLLAGLRWEHNESFGDKAIPRAAL
SFVVLRGGEIFSGTRLRGSYSTGVVEPSFEETFGISGTFPTLPNPDLKPEQARSFEAGLE
QGFLANKVSLYAAYYNSIYRDQIQFYFDPITFNSQYRNINRALAHGAEVDIQARLNKSLS
VSANYTYTSSQILSALPCDPAAGCDPRLFGEGSPLLHRPRHFGNLMLSYSRSRWGAQLAG
VAVGRRADDDFGLAPAPISYAAGYARFDASGYYTVSTHVTAYVNMENLLNHYYNEVVGYP
SLGFNFRAGLRFRFGGE
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
ttgcgccgtctgctcttatcttgctgcctactttttccggcagcgcttttcgccggtgaa
ctcactatccatgtggttgaccccgaccagcgtccggtcgtgaatgccaacgtcgcgctt
tattccagcaatcattccgaggtccgcactaccggcgctgacggtgctgcgcatttctca
aacgtgagcgatggcagttataacgtgcaggtgctcgcgccggggttcgccaaagccgaa
caaccggtccaacttcctgaacgcagcgattccactgttgcactttctgtcgaaaacgcc
gccgagagcgtggtagtaacggctacgtccagccccgtatcggaagctgagtctggctcc
gcggtttccactctggacgcccaacaactcacgctgaagcaggctaccgccgccagcgat
gcactgcgctttatgcccggcgtactcgttaccgccaccggccagcgcggatcgttgacg
acggtcaacgtgcgcggtggagagtcgcgctataaccacgtaattgtggatggcgttccg
gtgaacgaacccggtggccagttcgacttcggcgttgtgccgacggctcaaatggaccgc
atcgaggtggttcgcggctccgacagcgcggtttatggctcggacgcgatgagcagcgtg
gtgcagatgttcagcgccaccggaaccacgcggacccctgagtttcgcttcggcgccgac
ggcggcaacttcggcacggcacacggatttctctccattgccggcgcgtggcggcgtttc
gattacaaccttttcggcgatcagttcaataccaacggccagggactcaacaacgcctat
tccaacggcctcgaaggtttgaatcttggctatcgcgtgaatcaaagggcgcagctgcgc
ttccggctgcgtcatgcgaacagctggagcggtacctcgaacgagtggtggtttaacggg
gacgctgccctaccggcggattccgatcaatacgcgcgacagacgaattttctcgccgat
ctcgatctcaccatcgcgggtcccggcgcatggcagcaccgcttcagcggctttgagtac
aaccacgaccggcgcaatgtggacagtttcgttgatcccggccgtccagcagatttcgat
cagcccttcgattcggcggcgctttacaaccgcgcaggctttgattggcagtcggactat
tctccacgcagttggacgcggacttcgatcggctatcacttcgaaaaagagaacgggaat
ataaccagcaactactcgttcttcggattccctgagtacagcgtcacaattgggcagcgt
aacaaccaggctgtgtttggccagcagatgctgctctggaagcgcttcagcctgctcgct
ggcctgcgctgggagcacaacgagagcttcggcgataaagcgattccgcgcgctgccctt
agctttgttgtgttgcgcggcggcgagattttcagcggcacgcgtcttcgcggttcttat
agtaccggcgtggtagaaccgagtttcgaagagactttcggcatctcgggtacgtttccc
acgctgccgaatccggacctgaagcccgagcaggcacgctcgtttgaggccggattggag
caaggtttcctggcgaacaaggtctcgctctacgcggcctactacaacagcatttaccgc
gaccagatccagttctactttgacccaatcacgttcaacagccaataccgcaacatcaat
cgcgccctggcacacggtgcggaagtcgacattcaagcgcgcctgaacaagagcctctca
gtcagcgcgaactacacgtatacgtcgtcgcagatcctgagtgccctgccgtgcgatccg
gcggcaggatgcgatccgcgtctctttggcgaaggcagcccgctgctacatcgaccacgg
cacttcggcaacttgatgctgagctattcgcgtagccgctggggtgcgcaactcgcgggt
gtggctgtggggcgtcgtgccgacgacgattttggccttgctcccgcacccatttcctac
gctgcgggttatgcgcgcttcgacgcttcaggctattacacggtgagtacgcacgtgact
gcctacgtgaatatggagaacctgctgaaccactactacaacgaagttgtcgggtatccg
tcgctgggcttcaacttccgcgcgggattacgcttccgcttcggtggcgaatag
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