Candidatus Koribacter versatilis: Acid345_4772
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Entry
Acid345_4772 CDS
T00352
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
aba
Candidatus Koribacter versatilis
Brite
KEGG Orthology (KO) [BR:
aba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aba03032
]
Acid345_4772
03400 DNA repair and recombination proteins [BR:
aba03400
]
Acid345_4772
Enzymes [BR:
aba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Acid345_4772
DNA replication proteins [BR:
aba03032
]
Prokaryotic type
DNA Topoisomerases
Acid345_4772
DNA repair and recombination proteins [BR:
aba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Acid345_4772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SPATA1_C
Motif
Other DBs
NCBI-ProteinID:
ABF43771
UniProt:
Q1IH79
LinkDB
All DBs
Position
5637050..5639647
Genome browser
AA seq
865 aa
AA seq
DB search
MADEQNPLLPLPPSGDGGNPQNIQPINIEEEMKRSYLDYSMSVIIGRALPDVRDGLKPVH
RRILYAMHDMGLLHNRKHVKCAKVVGEVLGKYHPHGDSAVYDAMVRMAQDFSLRYPLVDG
QGNFGSVDGDPPAAYRYTEARMTAIAEELLADIDKDTVDFVANFDDTSAEPLLLPTKVPN
LLINGSNGIAVGMATNIPPHNLTEIVDACITIVNNPKSTLDDVLKFVQGPDFPTGGFIHG
KGGIKNAYQNGRGRFMMRAKVAVEHLPNKDAIVVTEIPYQVNKSTLIKKIADLVNDKTID
EISDVRDESDRDGMRIVIELKRSAQPEIVLNQLYKHTQMQESFSMIFLAVVNNQPKEMGL
VQALNHFIDHRIDVVRRRTFYLLQKAKDREHILEGYLMALDHLDNVIAIIRGSSNRADAR
ENLVAYFTGKKITINTTGKAPKVDPEKPFSTRQADAILELQLHRLTRLSIDEITSELKDV
RERIAEYESILASEKKLRSVIVKELEQIRKDYGDERRTIIQDEAAELSLEDLIADEQVAV
TVSHSGYLKRTPISTYRQQRRGGTGRKGMSTRDEDFVEMMFVASTHAYLLIFTNTGRVYW
LKVYEVPEIAAAGKGKHIGNLVALQPGESVRAILPVKSLEEESRYVFFTTRKGTVKKTAL
VDFSNVMARGIIAIGIDKDDELVAAQLTDSNQIVFLASHEGLAIRFDEADVRIMGRPAYG
VRGMDIGAKDYIVGMAITPKERKKGKNGGADTANLILSVTENGYGKRTDVDEYRLQTRGG
KGVINVKTTERNGKVVAIMLVTEDAEAMVISQYGKIIRTSTDSIREAGRSTQGVRLLHLE
PGDKVAAAVVIPDDEKAEAEPTLLQ
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgagcagaatcctctacttcctttgcccccgtccggcgacggtggcaatccg
caaaatatacagccaatcaacattgaagaggagatgaagcggtcttatctcgactattca
atgtcggtcatcatcggccgtgcgctgcccgacgtgcgcgacggactcaagccggtgcat
cgccgcattctttacgcgatgcatgacatgggcctgctgcataaccgcaagcacgtgaag
tgcgccaaggtcgtcggcgaagtgctcggtaagtatcacccgcacggcgatagtgctgtg
tacgacgcgatggtccgcatggcgcaggatttctcgttgcgctatcccctagtggacggc
cagggaaacttcggctccgtcgatggcgatccgccagcagcctaccggtacaccgaagct
cgcatgactgcgatcgcggaagaactcctcgccgatatcgacaaagataccgtcgacttc
gtcgctaacttcgacgacaccagcgccgagcccctccttcttcccaccaaggtcccgaac
ctgctcatcaatggttccaacggcatcgccgtcggcatggcaaccaacatcccgccgcac
aatctcaccgagatcgtggatgcctgcatcaccatcgtgaacaatccgaagtccacgctc
gatgacgttctgaaattcgtgcaaggccctgacttcccgaccggcgggttcatccacggt
aagggcggtattaagaatgcctaccagaacggccgcggtcgcttcatgatgcgcgccaag
gttgccgtcgagcacctgcccaataaagacgccatcgtcgtcaccgagatcccgtaccag
gtcaacaagagcacgctgatcaaaaagatcgccgacctcgtcaacgacaagaccatcgac
gagattagcgatgtgcgcgatgaatccgatcgcgacggcatgcgcatcgtgatcgaactc
aagcgcagcgcccagcccgaaatcgtgttgaaccagctctacaagcacacccagatgcaa
gagagcttcagcatgatcttcctcgcggtggtcaacaaccaaccgaaggaaatgggcctg
gtgcaagcgctcaatcacttcatcgatcaccgtatcgacgtagtgcgccgccgcaccttc
tacctgctgcagaaggcaaaggaccgcgagcacatccttgagggctacctgatggccctc
gatcacctcgacaatgtgatcgccatcatccgcggtagctcaaatcgcgccgacgcccgc
gaaaacctcgtcgcctacttcaccggcaagaagatcaccatcaacaccaccggtaaggcg
ccgaaggttgatccggaaaagccgttctccaccaggcaggccgacgcaatcctcgaattg
cagttgcaccgcctcactcgtctctcgatcgatgagatcaccagtgagttgaaagacgtg
cgcgagcgcattgccgagtacgaatcgattcttgccagcgaaaagaaactgcgctcggtg
atcgtgaaagagctcgagcagatccgcaaagattacggcgacgagcgccgcaccatcatc
caggacgaagccgccgagcttagcctggaagacctcatcgccgacgagcaagtcgcggtc
acggtcagccacagcggctacctcaagcgcacgccaatctcaacctatcgccagcaacgg
cgcggcggtaccggacgcaagggcatgagcacgcgcgacgaagatttcgtcgagatgatg
ttcgtagcctccacccacgcgtacctgctgatcttcaccaacacgggccgcgtctactgg
ctcaaggtgtatgaagtgccggagatcgctgctgccggcaagggcaagcacatcggcaac
ctcgtcgcgctgcaaccgggcgagagtgtgcgcgcgattctccccgtcaagagcctcgaa
gaagaaagcaggtatgtcttcttcaccacgcgcaagggcacggtcaagaagaccgcactc
gtggacttctccaacgtgatggctcgcggcatcattgccatcggcattgataaagatgac
gagttggtcgctgcgcagctcaccgacagcaaccagatcgtcttcctcgcctcgcacgaa
ggcctcgccatccgcttcgacgaagccgatgtccgcatcatgggacgccccgcttacggc
gtacgcggcatggatatcggcgcgaaggattacatcgtcggcatggccattacgcccaag
gaacggaagaagggcaaaaacggcggcgctgacaccgccaacctcattctcagcgtcacc
gagaatgggtacggcaagcgcaccgatgtggacgagtatcgcctgcagacgcgtggtggc
aagggcgtgatcaacgtcaaaaccaccgagcgcaatggcaaggtcgtcgccatcatgctg
gtcacggaagatgcggaagcgatggtcatcagccagtacggcaaaatcatccgcacctcc
accgactcaatccgcgaagccggccgctctacccagggcgtccgcctgctgcacctcgag
ccgggcgataaggtcgcagccgcggttgtcattccagacgacgagaaggcagaagcggag
ccaacgctgctgcagtag
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