Acinetobacter baumannii AB031: IX88_03670
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Entry
IX88_03670 CDS
T03376
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
abaa
Acinetobacter baumannii AB031
Pathway
abaa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
abaa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IX88_03670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abaa03021
]
IX88_03670
03400 DNA repair and recombination proteins [BR:
abaa03400
]
IX88_03670
Enzymes [BR:
abaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IX88_03670
Transcription machinery [BR:
abaa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IX88_03670
DNA repair and recombination proteins [BR:
abaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IX88_03670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Apocytochr_F_C
DUF2483
Motif
Other DBs
NCBI-ProteinID:
AIL74301
UniProt:
A0A059ZHD8
LinkDB
All DBs
Position
754906..759099
Genome browser
AA seq
1397 aa
AA seq
DB search
MKDLLDIMRKKTDSDGHAPVEFDRIRIGLASPEMIKSWSHGEVKKPETINYRTFKPERDG
LFCAKIFGPVKDYECLCGKYKRMKYKGVICEKCGVEVTTAKVRRERMGHIELASPVAHIW
FLKSLPSRIGLLLDMTLRDIERVLYFESYVVTDPGMTPFEKYQLLNDEEYFTALEEHGDE
FVAKMGAEAVQDLLKDIDLEAEISRLREEIPQTTSETKLKKASKRLKLMEAFKDSNNKPE
WMVMNVLPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNE
KRMLQESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVI
TVGPTLRLHQCGLPKKMALELFKPFIFAKLQASGQATTIKAAKKMVERETPEVWDVLASV
IRQHPVMLNRAPTLHRLGLQAFEPILIEGKAIRLHPLVCAAFNADFDGDQMAVHVPLTLE
AQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYITRDAVNAKGEGMVFADTHEVNR
ALATGQVAIHARVKVRVHQTVINENGEREQQTIIVDTTPGRCLLWEVVPEGLSFDMINLE
MTKKNISKLINSCYRKLGLKDTVIFADQLMYLGFRQATRSGVSVGMEDMLIPPTKHTIID
KAETEVREIEQQFEQGFVTAGERYNKVVDIWARTNDQVAKAMMDNLSYTLVKNKQGEDEK
QKSFNSIYMMSDSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIKANFREGLTVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVAQDLVITEPDCGTSGGLVMTPFIQGGDVIEPL
RDRVLGRVTAEDVRRASDDEVVLPRGTLIDEKIAAQLEEAGVDEVKVRSVIACESTFGVC
AKCYGRDLARGHLVNPGESVGVMAAQSIGEPGTQLTMRTFHVGGAASRTSAANSVQVRNK
GTVRFHNVKTVQHAKGHLVSVSRSGEIGIADELGRERERYKLPYGASILLKDGELVEAGG
IVATWDPHTHPLVTEVAGKARFSQIADGVTATSKTDDATGMTTVEILPVTARPASGKDLR
PAIVLDTTDGGEQFYFLPQNTIVTVRDGETIGVGDVIGRVPQESSRTRDITGGLPRVADL
FEARKPKEHAILAEVSGIVSFGKETKGKNRLVITPDDGSEIYEELIPKWRQINVFEGEHV
NRGETISDGPQNPHDILRLKGEVALTNYIVNEVQDVYRLQGVKINDKHIEVIVRQMLRKV
DIIDGGDTSFIKGEQVDYIRVVQENQAVLAQNKFPAKFERQLMGITKASLSTDSFISAAS
FQETTRVLTEAAVTGKEDDLRGLKENVVVGRLIPAGTGLAYHLERRRQEAEAAEHALHND
FSEVDQAFSQALNSEQF
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagacttgctcgatatcatgcgtaagaaaacggactcagatggtcatgcaccagtt
gagttcgaccgtatccgtattggtcttgcgtcaccagaaatgattaagtcatggtctcat
ggtgaagttaaaaaacctgagacaatcaactatcgtacgttcaaaccagaacgtgatggt
ttgttctgtgccaaaatctttggtccagtaaaagattacgaatgcttgtgtggtaaatac
aagcgtatgaaatacaaaggcgtcatttgtgaaaaatgtggcgttgaagtaactacagca
aaagttcgtcgtgaacgtatgggtcacattgagcttgcttctccagttgcacatatctgg
ttcttaaaatcgttaccatcccgtatcggtttattacttgatatgacacttcgtgatatc
gaacgtgtattgtatttcgaatcatacgttgttactgatcctggtatgacaccatttgaa
aagtatcaacttcttaatgatgaagaatactttactgctctagaagagcacggcgacgaa
tttgttgcaaaaatgggtgcagaagcagttcaagacttgttgaaagacatcgaccttgaa
gctgaaatttcacgtttacgtgaagaaattcctcaaacaacttctgaaacgaagttgaaa
aaagcgtctaagcgcttgaaattgatggaagcattcaaagactcaaacaacaagccagaa
tggatggtaatgaacgtacttccggtacttccaccagatttacgtccattagttccactt
gaaggtggtcgtttcgcgacttctgacttgaacgacttatatcgtcgtgtaattaaccgt
aacaaccgtttgaagcgtcttcttgaccttgcagcgccggacatcatcgtacgtaacgaa
aaacgtatgttacaagagtctgtagatgcgttgcttgataacggtcgtcgtggtcgtgca
attactggttctaacaaacgcccattaaaatctttggcagatatgatcaaaggtaaacaa
ggtcgtttccgtcagaacttgttaggtaagcgtgttgactactctggtcgttcggtaatt
actgtaggtcctactttacgtcttcaccaatgtggtcttccgaagaaaatggcacttgaa
ttattcaagccattcattttcgcgaaattacaagcttcaggtcaggcaacaaccattaaa
gctgcgaagaaaatggttgagcgtgagactccggaagtttgggacgttcttgcatctgta
attcgtcaacatccagtaatgttgaaccgtgcgccaacacttcaccgtttaggtcttcaa
gcatttgaacctattcttattgaaggtaaggcaatccgtcttcacccgctcgtctgtgct
gcgttcaacgccgacttcgacggtgaccaaatggcggtacacgttccattgacacttgaa
gcacagttagaagctcgtgcattgatgatgtcaacaaacaacatcttgtcaccagcaaac
ggtgagccaatcatcgttccttctcaggacgttgtcttgggtctttactacatcactcgt
gatgcagtaaacgcgaaaggtgaaggcatggtgtttgcggatactcacgaagtaaaccgt
gcacttgcaactggtcaagttgcgatccatgctcgtgttaaagtacgtgtgcatcaaacg
gttatcaatgaaaatggtgagcgtgaacagcaaactattattgttgatacaacaccaggt
cgttgcttactttgggaagttgttccagaaggtttaagcttcgacatgatcaaccttgag
atgactaaaaagaacatctctaagttaatcaactcttgctaccgtaaacttggtttgaaa
gatacagttatcttcgctgaccaattaatgtacttgggcttccgtcaagcgactcgttca
ggtgtatctgtaggtatggaagacatgttaattccacctacgaaacacacaattattgac
aaagcggaaacagaagttcgtgaaatcgaacaacagttcgaacaaggtttcgtaactgct
ggtgaacgttataacaaagttgtcgatatttgggcgcgtacaaacgaccaagttgctaaa
gcaatgatggataacttgtcttatacacttgtgaaaaacaaacaaggtgaagacgagaag
caaaaatcattcaacagtatctatatgatgtctgactctggtgcccgtggtagtgcggct
cagattcgtcagcttgcaggtatgcgtggtttgatggcaaaaccggatggctcgattatt
gagactccaattaaagcgaacttccgtgaaggtttgacagtactccagtacttcatttca
acacacggtgcgcgtaaaggtttggctgatactgcattgaaaactgcgaactctggttac
ttgactcgtcgtcttgtagacgtagcacaagacttagtaattactgagccagattgtggt
acaagtggtggtctagtgatgactccattcattcaaggtggtgatgtcatcgagccatta
cgtgaccgcgtattaggtcgtgtaactgctgaagatgtacgtcgtgcatctgatgatgaa
gttgtattacctcgcggtacgttaattgacgagaaaatcgcagctcagcttgaagaggct
ggtgtcgatgaagttaaagtacgttctgtaatcgcatgtgaatcaacattcggtgtatgt
gcgaaatgttatggtcgtgaccttgctcgtggtcacttggtaaacccaggtgagtcagta
ggtgtaatggctgcacaatcaatcggtgaacctggtacacagttaacaatgcgtacgttc
cacgtgggtggtgctgcaagccgaacttctgctgcaaacagtgttcaagtacgtaacaaa
ggtactgtacgtttccataacgtaaaaactgtacaacatgcgaaaggccacttggtttca
gtttcacgttcaggtgaaattggtattgccgatgagttaggtcgtgagcgtgaacgctac
aaacttccttacggtgcaagcatcttgttgaaagatggtgagcttgttgaggctggtggt
atcgttgcgacatgggatccgcatacgcatccattggtaacagaagttgctggtaaagca
cgtttcagccaaattgctgatggtgtaactgcaacatcgaaaactgatgatgcaactggt
atgacaactgttgaaatcttgcctgtaacagcacgtcctgcttctggtaaagatttacgt
ccagcaatcgtattagatacaactgatggcggtgaacagttctacttcttaccacaaaac
acaattgtgactgttcgcgacggcgaaacaattggtgtgggtgacgttatcggtcgtgta
ccacaagaatcttcacgtactcgtgatattaccggtggtcttccgcgtgttgctgacttg
ttcgaagcacgtaagccgaaagaacatgcgatcttggcagaagtgtctggtatcgtaagc
ttcggtaaagagaccaaaggtaagaaccgtttggtgattactccagatgacggttctgaa
atttacgaagagttgattccgaaatggcgtcaaatcaacgtgtttgaaggcgaacatgtg
aaccgtggtgaaaccatttctgatggtccacaaaatccacatgacatcttacgcttgaaa
ggtgaagttgctttaactaactacatcgtgaacgaagttcaagacgtttaccgtcttcaa
ggtgtaaaaatcaacgataagcacattgaagttatcgtacgtcaaatgttgcgtaaagtt
gatatcatcgatggtggtgatacaagcttcatcaaaggtgagcaagtggattacatccgt
gttgttcaagagaaccaagctgtcttggctcagaacaagttccctgcgaagtttgaacgt
caattgatgggtattacgaaagcatcgctttctactgactcattcatctctgctgcatcg
ttccaggaaacaactcgtgtgttaactgaagcggctgtaacaggtaaagaagatgattta
cgtggcttgaaagaaaacgttgtagtgggacgcttgattccagcgggtactggtcttgca
taccacttagagcgtcgtcgtcaagaagcggaagcagcagaacatgctcttcacaatgac
ttcagcgaagtagaccaagcatttagccaagctttaaactcagaacaattctaa
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