Acinetobacter baumannii AB031: IX88_04300
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Entry
IX88_04300 CDS
T03376
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
abaa
Acinetobacter baumannii AB031
Pathway
abaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IX88_04300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abaa03019
]
IX88_04300
03009 Ribosome biogenesis [BR:
abaa03009
]
IX88_04300
Enzymes [BR:
abaa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
IX88_04300
Messenger RNA biogenesis [BR:
abaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IX88_04300
Ribosome biogenesis [BR:
abaa03009
]
Prokaryotic type
rRNA processing factors
IX88_04300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AIL74419
LinkDB
All DBs
Position
complement(889193..892525)
Genome browser
AA seq
1110 aa
AA seq
DB search
MKRMLINATHAEEVRVALITGNRLYDFDLENRTREQKKSNIYKGHVTRVEPSLEAVFVEY
GAGRQGFLSMREIANSYFQADPRQTSNIRELITEGTELLVQVEKEERGNKGAALSTFISL
AGRYLVLMPNNPKGGGISRQISGSVREELKEILASLNVPRGMSVIVRTAGIGRTQEELQL
DLQHLLDLWAQIQGTASSGPSPMLVHQEAGVVTRAIRDYLRDDVAEILIDSEQAYNEAYN
FVKAVMPRQLDKLKTYTLNEPLFAHFGIESQIQTAYEREVKLPSGGSIVIDQTEALVSID
INSAKSTRGHDVEETALNTNLEAAEEIARQLRLRDIGGLVVIDFIDMTKERNQRMVEAKL
REATQSDRARIQFGQLSRFGLMEMSRQRLRPSLEEATGYVCPRCHGTGMVRDLRSLSLSI
MRKVEEIALRERHGEVQVEVPVEIAAFLLNEKRHSLVYLEQTSGVRVTVLPHPHLETPHY
EIAYNPDGFAPSSYERTEATRSSEKELGYESSEWHLEEADHGHAHVTATASTHAAAQKKA
NHATQPVAQPSAQKAASPCAWLENLFVQKQAQTVDQSRSAQNAAAAIEQMVNTGAVSRGQ
FGQVAVPAIAEVAPVQSNNAYISQSPVKQDVREHVEKDDKSQQQRQNNKKRKHKEQREQP
HQSHEQQHQVHEEVIQLSRQEQRELKRQQKRQQQQDQQHQNNDVQHTENAVPRRDRNNQQ
RPNRPNRHRDPSVLNENQNTPVVIDEKQIKVDVIDAPKHDVMNTALIINVDQGQSEIVAL
TPEHRHVERVETTSTEVAQEPTPAPVVAEKAAVVETKEEAQPSQEAAQPQIKRASNDPRM
RRRQQREAKHAKAATPSIAPSQIPTLAQHTIGSLIRHVYGEDCTVLIEQFGLVPTFNRAL
QKFAEQYASTLVVEVSAETEEKKPVTRDAELPSHKPAEEAEPAPVLPLTPPQAPAPRVAN
DPRERRRLAKLAAEQAFEQVKQQHSAQEEVATPAPLAEETVAAPTAETQATVEPAQQPLE
LNQSTEVVQPEAAPAEEKATEETVAEAPAAKEPAPSKAASKAKAAAEETVAPTEATTDAE
SEDVKADKDKPSRPRRPRGRPPKKANPVAE
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtatgttgattaatgcaactcatgccgaagaagttcgcgttgcacttatcact
ggtaatcgtctttacgattttgatttagagaatcgtacccgagaacagaaaaaatccaat
atctataaaggccatgtcacccgcgtagaaccatctttagaagctgtttttgttgaatat
ggcgcaggtcgtcaaggcttcttgtctatgcgtgaaattgctaacagctattttcaggca
gacccacgtcaaacttcaaacattcgtgaacttattactgaaggcacagagcttttagtt
caggttgaaaaagaagaacgtggtaataagggtgcagcactttctacgtttatttccctt
gcaggccgttatttagttcttatgccaaataacccgaaaggtggtggtattagccgtcaa
atttcaggttcagtacgtgaagaattaaaagaaattttagcttctttaaatgtacctcgt
ggtatgagcgtgattgttcgtactgccggtattgggcgtactcaagaagaattacagctc
gatttacaacacttgcttgacctttgggcacaaatccaaggtacagcgagctcaggccct
tctccgatgcttgttcatcaagaagcgggtgtagtaacacgtgcaattcgtgattactta
cgtgatgacgttgctgaaatcttaattgatagcgaacaagcttataacgaagcatataac
tttgttaaagcagtgatgcctcgtcaattagacaaattaaaaacttatactttaaacgag
ccattgtttgctcattttggtattgaaagccaaattcaaactgcttatgaacgtgaagta
aaacttccttcgggcggttcaatcgtcattgaccagactgaagctttagtttcaatcgat
attaactctgcgaaatcgactcgcggtcatgatgttgaagaaactgcactgaacaccaac
cttgaagcagcagaagaaattgctcgccaacttcgtttacgtgacattggcggtttagtt
gttatcgacttcatcgatatgactaaagagcgcaaccaacgcatggttgaagcaaaactt
cgtgaagcaactcaaagcgatcgtgcccgtatccagttcggtcaattgtctcgttttggc
ttaatggaaatgagccgtcaacgcttacgtccatcgctagaagaagcaacaggttatgta
tgccctcgctgtcatggtacaggcatggttcgtgacttacgttcgctttctctttcaatt
atgcgtaaagttgaagagattgcacttcgtgaacgtcatggtgaagttcaggttgaagtt
ccagttgaaattgcagccttcttgcttaatgaaaaacgccatagtctggtgtatttagag
caaacttctggtgtacgtgtgactgtattaccacacccgcacttagaaactccacattac
gaaattgcatataacccagatggctttgctccatctagctatgaacgtacagaagcaacc
cgttctagcgagaaagagttaggttatgagtcttctgaatggcatttagaagaagcagat
catggccatgctcatgtaactgctacagcttcaactcatgctgcggctcagaaaaaagca
aatcatgcaactcaacctgtagcacaaccttctgctcaaaaagcagcaagcccatgtgca
tggttagaaaacctgtttgttcaaaaacaagcgcaaacagttgatcaatctcgttcagca
caaaatgctgctgctgcgattgagcaaatggtgaatacaggcgcagtaagccgcggacag
ttcggtcaagtagccgtacctgctattgcagaagttgccccagttcaatcaaataacgct
tatatttcacagtcacctgtgaaacaagacgttcgtgaacatgttgaaaaagatgataaa
tctcagcaacaacgtcagaacaacaaaaagcgtaaacataaagagcaacgtgaacaacct
caccaatcacatgaacagcaacatcaagttcatgaagaagtgattcaattgtcacgccaa
gaacaacgtgagttaaaacgtcagcaaaaacgtcaacagcagcaagatcagcaacatcaa
aataatgatgtacaacacactgaaaatgctgtgccacgccgtgaccgtaataatcaacaa
cgtccaaaccgtccaaatcgccaccgcgatccaagtgtattaaatgaaaatcaaaataca
ccggttgttattgatgaaaaacaaattaaggttgatgtgattgatgcacctaagcatgat
gtcatgaacactgctttaatcatcaatgttgatcaaggtcaaagtgagattgttgcactt
acgcctgagcatcgtcacgttgagcgagttgaaacgacttctactgaagttgctcaagag
ccaactccagctcctgttgtagccgagaaagctgctgtagttgaaaccaaagaagaagct
cagccaagccaagaagctgctcagccacaaatcaaacgtgctagcaatgaccctcgtatg
cgtcgtcgtcagcaacgtgaggctaaacacgctaaggcagctacgccatctattgcgcca
tcgcaaattccaactttggcacaacacacaatcggtagtttaatccgtcatgtgtatggt
gaagattgcaccgtattgattgaacaatttggtctagttccaacgtttaatcgtgctttg
cagaaatttgcagaacagtacgcaagtacgttagtggttgaagtttctgctgaaacggaa
gagaaaaagccggtaactcgtgatgcagaacttccaagccataaaccagctgaagaagca
gaacctgcaccagtacttccgcttactccgccgcaagcaccagctccacgtgttgcaaat
gacccgcgtgagcgccgtcgtttagcaaaacttgctgcggaacaagcatttgagcaagtg
aaacaacaacattctgctcaagaagaagttgctactcctgctcctttagcagaagaaacc
gttgctgctccaactgctgaaacacaagcaacagttgaaccagcacagcaaccgcttgaa
cttaatcagtcaactgaagtcgtacaacctgaagctgctcctgcagaggaaaaagctaca
gaagaaacagtagctgaagctcctgcggcaaaggaacctgcgccatcaaaagcagcaagc
aaagcgaaagcagcggctgaagaaacagtagctccgactgaagcaacaactgatgccgaa
tcagaagacgttaaggcagataaggacaaaccgagccgccctcgtcgccctcgtggccgt
ccgccaaaaaaagctaatcctgtagctgagtaa
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