Acinetobacter baumannii AB031: IX88_07310
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Entry
IX88_07310 CDS
T03376
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K14159
ribonuclease HI / DNA polymerase III subunit epsilon [EC:
3.1.26.4
2.7.7.7
]
Organism
abaa
Acinetobacter baumannii AB031
Pathway
abaa03030
DNA replication
abaa03430
Mismatch repair
abaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IX88_07310
03430 Mismatch repair
IX88_07310
03440 Homologous recombination
IX88_07310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abaa03032
]
IX88_07310
03400 DNA repair and recombination proteins [BR:
abaa03400
]
IX88_07310
Enzymes [BR:
abaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IX88_07310
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
IX88_07310
DNA replication proteins [BR:
abaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IX88_07310
RNase H
IX88_07310
DNA repair and recombination proteins [BR:
abaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IX88_07310
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_H
RNase_T
DNA_pol_A_exo1
RVT_3
Motif
Other DBs
NCBI-ProteinID:
AIL74992
LinkDB
All DBs
Position
complement(1535431..1536810)
Genome browser
AA seq
459 aa
AA seq
DB search
MSQTITLYVDGACRGNPGLGGWGAYVITEQGEHKLFGGEPDTTNNRMELTAAIEGISFCP
PDAQLIVWTDSNYVKQGITEWIHGWKKKNWKDVKNPDLWQKLDAVCAGRNIEWNWIKGHA
GHAGNEMADQLANLGADKTAQELKQPQSATVSQDIKKPEQDWLLDDPFGFDLVETTEDET
VTLEQTQEVEMIVVDEEMNVVEAVEQEEQQQNTNIHPQIVMTEAKLKLQGPRQLILDTET
TGFYFQDGDRIIEVGAIEMINRKLTGSSIHIYINPEKPVGDSVQVHGITDEFLVDKPKYA
EIADTLFEYLKGAEIIAHNATFDMNFLDMEFKRVGLPALSEVCEVTDTLALAKNKHPGQK
NSLDALVRRYEIPARDRTFHGALLDAEILSDVYLAMTGGQVSFDMDALSQSGIDQQKTTK
ARVQIKLPVIYPSDEELNIHETWVKEFEKKHGEPCLFAK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaacaatcacactgtatgttgatggtgcatgtcgtggcaatccgggtttaggc
ggttggggtgcatatgtcattaccgaacagggtgaacataaattatttggcggtgaaccc
gacacaacaaataaccgtatggaacttactgcggctattgaaggaatttctttttgccct
cctgatgctcaattaattgtctggacagactcaaattatgtgaagcaaggtattacagaa
tggattcatggttggaaaaagaaaaactggaaagatgttaaaaatcctgacctatggcaa
aaactcgatgccgtttgtgcgggtagaaatattgaatggaactggattaaaggccatgca
ggacatgcaggtaatgaaatggctgaccaacttgcgaatttaggtgcagacaaaactgct
caagaacttaagcaaccacagtcagccactgtatcgcaagatataaaaaagcctgaacag
gactggttactagacgatcctttcggattcgatctggttgaaacaaccgaagatgaaaca
gtcactttagagcagacacaagaagttgagatgattgttgtggatgaagaaatgaatgta
gttgaagctgtagaacaagaagaacaacagcaaaataccaatattcatccacaaattgtg
atgactgaagccaagcttaaattacaaggcccaagacaactcatactcgatacggaaaca
actggtttctattttcaagatggtgaccgcattattgaagtcggtgccatcgaaatgatt
aaccgtaagcttacgggcagttcgattcacatttatattaatcctgaaaaaccagtgggt
gactctgttcaagtccacggtattactgatgagtttttggtcgacaaaccaaaatatgca
gaaattgcagataccttatttgaatacctaaaaggcgcagaaattattgcccataacgca
accttcgatatgaacttcttagatatggagtttaaacgtgttgggttacctgctctttca
gaagtttgtgaagttaccgatactttagctttagcgaaaaataagcatcctgggcagaaa
aactcacttgatgccttagttagacgttatgaaattccagcgcgtgaccgtactttccat
ggcgcattactcgatgctgaaattctttctgatgtttacttggcaatgacaggtggtcaa
gtttcctttgatatggatgccctatcgcaaagtggaattgaccagcaaaaaacgaccaaa
gctagagttcaaattaaattacctgttatttacccttcagatgaagagctaaacatacat
gagacttgggtcaaagaatttgagaaaaaacatggagaaccttgcctttttgcaaaataa
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