Acinetobacter baumannii AB031: IX88_08105
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Entry
IX88_08105 CDS
T03376
Name
(GenBank) ATP-dependent helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
abaa
Acinetobacter baumannii AB031
Brite
KEGG Orthology (KO) [BR:
abaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abaa03019
]
IX88_08105
Enzymes [BR:
abaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
IX88_08105
Messenger RNA biogenesis [BR:
abaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
IX88_08105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
T2SSE
NACHT
PhoH
AAA_30
TsaE
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AIL75140
LinkDB
All DBs
Position
1709009..1712866
Genome browser
AA seq
1285 aa
AA seq
DB search
MLNGLNIDQWVMARDRYRLNRLRKDKKANTAEIEKLFEQSNAKVRQRFERLPKIKLNQDL
PVTQYADRLIEAIQNHQVIIVAGETGSGKTTQLPQIAMLAGRGLTGMIGHTQPRRLAARS
VSQRIAEEVGEKLGESIGFKIRFNEQGSQDSIVRLMTDGILLAELGNDRFLSKYDTIIID
EAHERSLNIDFIMGYLKQLLPKRPDLKVIVTSATLDVNRFSNYFNNAPIFEVEGRSYPVE
VRYRPISEMNIGGSDDDEFDDFEENLPRAVVQAVEECFADAEEKGHPEHADILIFSSTEQ
EIRELQETLQKYGPRHTEILPLYARLAVSEQQKIFSPSGKGRRIIIATNVAETALTVPNI
RYVIDSGFARISRYNYRSRVQRLPIEAISQAAANQRKGRCGRVAPGVCIRLYSEEDFLSR
PEFTEPEIKRTNLASVILQMQSLGLGELENFDFIEPPDFRLVNDGRKLLIELGALNEKKN
ELTKVGQMMARMPIDPRLARMIVGGAHFGVLKEILVVVSALAVQDPRERPADKQMQADQK
HALFKEADSDFLFYLKLWDTLNPKGEAGMSENKRRQFAKQHFLSWLRLREWKQTHQQLVE
LAEGLKLSFNEKSANYENLHRALLTGLLSFIANKTDERNTFMAVRQQKAKVFPASTLHKT
NTAWVMAFEMVETSQVYLRTLAKIDPEWILLAARDLLKYHYFEPHWSKKAGIVNAYAQIS
LFGLIIEPKRLVNFEKVDQPAAHEIFLRDALTTGNLGTVPPFLKHNLLKLEEVERVEDKL
RRRDLVVDEETIYQFYASKIPEEIASRRSFEDWRATVEAKNPRYLYVEDDALWLNDRPTT
QQFPDHLHNGQLRLATTYRFDPSHDEDGATVQIPVQALPQVDENIWSWGIPGWRLDLIEA
LLKALPKDKRRNLVPIPDTARKLMQGIDAVHLRQHIFSYLAFALRGEQITEKDFSFERID
PYLVPFIKVIDEKGKLIAKGRDLAELKARCRVETHRPVKQQKGEFKTFPENFTFEASQKV
TGVVVKQYQALVPTKTFAELEAKDESGVVIQTFNDQAEAIKQHREGIIRLVHMQLGDLVR
QLKKQISKPLALAYSPLGDKAKLEQMLVYATLQMAITTLPINAGEFNQLLEQIKKQFLSY
GQQVLEQLSDIYIQWQQIRRQLLVLDPDVFGRSIDDIEDQLDLMSLGNFVYCQPVDLWQE
YPRYLKALLLRLDRLPNNLQRDHAAIDDVDPWMDKVFKFKNDPRIKELYLMLEELRISLF
SQPMKTKMPISPTRLQKLWDRLGIS
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
gtgctgaatggtttaaatatagatcaatgggtgatggcaagagatcgttaccgtttaaat
cgtttacgtaaagataaaaaagccaatactgcagagattgaaaaattatttgaacagtct
aatgcaaaagttagacagcgttttgaacgcttaccaaaaatcaaattaaatcaggatctt
cctgtaacccaatatgctgaccgtttaatagaagcgattcaaaatcatcaggtcattatt
gtggccggtgaaacaggttcagggaaaactactcagctccctcaaattgcaatgttagca
gggcgtggcttgactggcatgattggtcacacccagccacgtcgtttagctgcacgtagt
gtttcacagcgtattgctgaagaagtcggcgaaaaacttggcgagtcaattggttttaaa
atccgttttaatgaacaaggctcgcaagattcgattgtccgtttaatgaccgacggtatt
ttgcttgccgagttaggcaatgaccgcttcttgtctaaatatgacaccattattattgat
gaagcgcatgagcgctcactcaatatcgattttattatgggctatttaaagcagttactg
ccaaaacgcccagatctaaaagtgattgtgacttcggcaactttagatgtaaatcgtttt
agtaactactttaataatgcaccaatttttgaagtagaagggcgtagctatccggtcgaa
gtgcgttatcgtccaatttcagaaatgaatattggtggtagtgatgacgacgagttcgat
gactttgaagaaaacctgccgcgtgcagtcgtacaagctgtagaggaatgctttgctgat
gccgaagaaaaaggccatccagaacatgcagatatcttgattttctcaagtacagagcaa
gaaattcgagaattgcaggaaaccttacaaaagtacgggccgagacataccgaaatttta
cctttgtatgcgcgtttagccgtttctgagcaacaaaagatttttagcccaagtggaaag
ggccgccgtattattattgcgacgaacgttgcagaaactgcactgactgttcctaatatt
cgctacgtgattgatagcggctttgcacgtatatctcgttataactaccgttcacgcgtg
caacgcttaccgattgaggcaatttcacaagctgcagcaaatcaacgtaaagggcgttgt
ggtcgtgttgctccaggtgtttgtattcgtttatatagcgaagaagactttttaagtcgt
cctgagtttaccgaacctgaaattaagcgaaccaacttggcatcggttattctgcaaatg
cagagcttaggtttaggtgagctggaaaactttgatttcattgagccgccagatttccgt
ctagtcaatgatggtcgtaagttgctcattgaattaggggcgctgaacgagaagaaaaac
gaactgactaaagtcggccaaatgatggcacgtatgccgattgatccaagactcgcacgt
atgattgtgggtggggctcattttggtgtactcaaagaaattttggtggtggtcagtgca
cttgcagttcaagacccgcgtgaacgtccagcagataaacagatgcaagctgatcaaaag
cacgcactattcaaagaggcagattcagattttctgttttatttaaaactttgggatact
ttaaatcctaaaggtgaagcaggaatgtcggaaaacaagcgtcgtcaatttgctaagcag
catttcttaagctggttacggttacgtgaatggaaacagacacaccagcagctagttgag
ctggccgaaggcttaaaacttagttttaatgaaaagtctgcaaattatgaaaatttgcac
cgtgcgttactaacaggtttattatcttttattgctaataaaactgatgaacgtaatacc
tttatggcagtgcgtcagcaaaaggctaaagtttttcctgcgagtacgttacataaaacc
aatactgcgtgggtgatggcttttgagatggtggaaacctctcaagtctatttacgtaca
ttagcaaaaattgatcctgaatggattttgcttgctgcacgcgacttattgaaatatcac
tatttcgagccgcattggtctaaaaaagccggtattgtaaatgcttatgcacaaatttca
ttgtttggtttaattattgaaccgaagcgtttggttaattttgagaaagttgaccaacct
gctgcacatgagattttcttacgtgatgcattaaccacaggaaatctgggtacagttcca
ccatttttaaaacataacttgcttaaacttgaagaagtagagcgagttgaagataaatta
cgtcgccgcgatttggtggttgatgaagaaacgatttatcagttctatgcgtcgaaaatt
cctgaagaaattgcgagtcgtcgtagttttgaagactggcgtgcaaccgtagaagcaaaa
aatccgcgttatttatacgtggaagatgatgcgctttggctcaatgaccgtccgaccacc
cagcaattccctgatcatttacataatggtcagttacgcttggcaactacttatcgcttt
gacccaagtcatgatgaagatggcgcaacggtccaaattccggtacaggcattgccacag
gtagatgaaaatatttggtcgtgggggattccaggctggcgtttagatctcattgaagcc
ttattgaaagccttaccaaaagataaacgtcgtaacctcgtaccaattccagatacggcg
cgtaagctcatgcaaggtattgatgctgtacatttgcgacaacatatctttagctatctg
gcgtttgctttacgtggtgagcagattacggaaaaagatttttcatttgaacgcatagat
ccgtatttggtgccttttattaaggtgattgatgaaaaaggtaaattgatcgccaaaggc
cgtgacttggctgagttgaaggctcgttgtcgcgtagaaacgcatcgtccggtgaaacag
caaaaaggtgaatttaaaaccttccctgaaaactttacctttgaagcttcacagaaggtg
acaggtgttgttgttaaacaatatcaagctttagtgccaactaaaacttttgccgaactt
gaggcgaaagatgagtctggcgtggttatacaaacatttaacgatcaggcagaggcgatt
aaacagcatcgagaaggtattattcgtctggtccatatgcaacttggcgatttggttcgc
cagttgaaaaagcagatttcaaaaccgcttgcgttggcttattcacctttaggtgataaa
gctaaacttgagcaaatgctggtatacgcgactttacaaatggcaattacgactttgcca
atcaatgctggtgaatttaatcaattgcttgaacaaattaaaaaacaatttttgagctat
gggcagcaagtacttgagcaattaagtgatatttatattcagtggcaacaaatccgtcgt
caacttttagtacttgatccggacgtatttggacgcagtatcgatgatattgaagatcag
ctagatttaatgtcactcggcaattttgtctattgccagccagttgatctttggcaggaa
tatccacgttatttaaaagcgctgctattgcgtttagatcgattgccaaataatctacag
cgagatcatgctgctattgacgatgtcgatccatggatggacaaggtatttaagttcaaa
aatgatccaagaatcaaagaattgtatttgatgctggaagaattacgtatttctttattt
tctcagccgatgaaaaccaagatgcctatttcgccaactcgactacaaaagttatgggat
cgtttgggaatcagttaa
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