Acinetobacter baumannii BJAB0715: BJAB0715_03238
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Entry
BJAB0715_03238 CDS
T02727
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
abab
Acinetobacter baumannii BJAB0715
Brite
KEGG Orthology (KO) [BR:
abab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abab03016
]
BJAB0715_03238
Enzymes [BR:
abab01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
BJAB0715_03238
Transfer RNA biogenesis [BR:
abab03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
BJAB0715_03238
Prokaryotic type
tRNA splicing ligases
BJAB0715_03238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
AGQ07884
LinkDB
All DBs
Position
3375291..3376496
Genome browser
AA seq
401 aa
AA seq
DB search
MGIQKILNEEAQYGVPVKIFTQDIDSESIEQLKKMAQLQFIYSHIAVMPDVHVGKGATVG
SVIPTKHAIIPAAVGVDIGCGMNAIRLSLKASQLPDNLSRLRDAIERKVPVGFALHKQVK
AKASSIIPLEKRLEPIIKKHPGLVRMLRQFEATWQKQLGTLGGGNHFIELCIDENQDVWV
MLHSGSRGLGNVIGTYFIELAKKEAQHRFGHVPDKDLSYFAEGSQSFNDYVEAVEWAQEY
AFENRKEMMRLILEAIRPLLPSFQMTKEAINCHHNYVSQETHFGENLFVTRKGAIRAGLD
ELGIIPGSMGARSYIVKGKANPESFCSCSHGAGRKMSRSKAKVLFNQQDLIEQTQGIECR
KDSGVVDEIPSAYKDIDEVIANQADLIEVVHTLKQVLCIKG
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgggcatacaaaagatattaaacgaagaggcacaatatggtgtccccgttaaaattttc
actcaagacatagatagtgaaagtattgagcaactcaagaaaatggcacaactgcaattt
atatattctcatattgctgttatgcctgatgtgcatgttggaaaaggtgcaaccgtaggc
agcgtcattcctaccaaacatgccattattccagctgcagtgggtgtagatattggttgc
ggaatgaatgctattcgtttgagcctgaaagcttcacaacttccagataacttaagtcgc
ttgcgggacgccattgaacggaaagtgccggttggatttgctttgcataaacaagtcaaa
gcgaaagcttctagcattattccacttgaaaaacgcttagaacctattattaaaaagcat
ccgggtcttgtccgaatgcttcgtcagtttgaggcaacatggcaaaaacagttgggcact
ttaggcggcggtaatcactttatagagttatgtattgatgaaaatcaagatgtatgggtg
atgctccattcgggcagccgaggtcttggtaacgtcataggtacttattttattgagtta
gccaagaaagaggcacaacatcgctttgggcacgtgcctgataaagatttaagttatttt
gctgaaggctcgcaaagctttaatgattatgtagaagcagtagagtgggctcaagaatat
gcttttgaaaatcgtaaagaaatgatgcgattaatattagaagcaattcgccctcttcta
ccttcttttcaaatgacgaaagaagcaatcaattgtcaccataactatgtgagtcaagaa
acacactttggtgaaaacctttttgttacaagaaaaggggcaattagagcaggtttagat
gagttaggaattattccaggctctatgggagcacgctcgtatattgttaaaggtaaagca
aaccctgaatctttttgttcttgttctcatggagctggccgcaaaatgagccgaagcaaa
gcaaaagttctttttaatcagcaggacttgattgaacaaacacaagggattgaatgccgt
aaagacagtggtgtagtcgatgaaattccaagtgcctataaagatattgatgaggttata
gccaatcaggcagatctcattgaagtcgttcatactcttaaacaagttttatgtattaaa
ggttaa
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