Luteitalea pratensis: LuPra_02995
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Entry
LuPra_02995 CDS
T04394
Symbol
rhlE_2
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
abac
Luteitalea pratensis
Pathway
abac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LuPra_02995 (rhlE_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abac03019
]
LuPra_02995 (rhlE_2)
Enzymes [BR:
abac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LuPra_02995 (rhlE_2)
Messenger RNA biogenesis [BR:
abac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LuPra_02995 (rhlE_2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AMY09771
UniProt:
A0A143PMR3
LinkDB
All DBs
Position
complement(3656041..3657654)
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AA seq
537 aa
AA seq
DB search
MSPRPERSARTGRSRSGPRRPPARPQATARNAELLAKFETLTPNIEPRRFTDLITVPELL
MGVDDRRFEQTTPVQSAVFDTVAAGHDLVACAETGTGKTAAFLLPLMQRLLRANAEREGS
ARILVLAPTRELAVQIEDDVQGFGYHTSMRCAAVFGGVGMDGQEQALKAGVDVVVATPGR
LMDHLRAGIAAFTGLDVLVLDEADRMLDMGFWPDVKFIVSQLPPGRPRQTLLFSATMPEE
VMGFALEIMQSPRLVQLGIRNAPATTITHKAELLGRHEKTAWLSRFLRRAPGPTLVFSST
KRGADRLARDLQSQGIRAAALHADRTQADRLRAVEGFKSGTHRVLVATDIAARGLDIDAI
ETVVNFEVPFNREGYVHRVGRAGRAGSTGTAITLVSPDERHDMEEIADAFGLVLFEDAHA
ELVEAGEAIDGALPPVETASVAAERPRRPRTRRPRASEPAATPAVADVASEATSSPQESE
TTDTAADTPAEDGTGDAARKRRRRRRRRSGPKSDETVEGDGSPPEATGNGSDESGEP
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
gtgagtccacgccctgaacgaagcgcccggaccggccgaagccggtccgggccgcggcgc
cctcccgcccgtccccaggccacagcccgcaacgccgagctgctggcgaagttcgagacc
ctcacccccaacatcgagcctcgccgcttcacggatctgatcacggtcccggaattgctc
atgggcgtcgatgatcggcgcttcgagcagacgacccctgttcagagtgcggtgtttgac
accgtggccgccggccacgacctcgttgcctgtgccgaaaccggcaccggcaagaccgcg
gcgttcctgctcccgctcatgcagcggctgctgcgggccaacgccgagcgcgaaggctcg
gcccgcatcctggtgctggcccccacgcgcgaactcgccgtccagatcgaggacgacgtc
cagggcttcgggtaccacacgtccatgcgctgcgcggcggtgttcggcggcgtcggcatg
gatggccaggaacaggcgctcaaggccggcgtcgacgtggtcgtggccacgcccggtcgg
ctgatggatcacctgcgcgccggcatcgcagccttcaccgggctcgacgtgctcgtgctc
gacgaagccgaccggatgctggacatgggcttctggccggacgtcaagttcatcgtgtcg
cagttgccgcctggccgcccgcgccagacgctgctcttctccgcgacgatgcccgaagag
gtcatggggttcgcgctggagatcatgcagtcgccgaggctggtgcaactcggcatccgc
aacgcacccgcgacgaccatcacgcacaaggcggagttgctcgggcggcatgagaagacg
gcgtggctctcgcgcttcctgcggcgcgcgcccgggccgaccctggtgttctcgtcgacc
aagcgcggcgccgaccggctcgcacgcgacctgcagtcgcagggcatccgcgcggcggcc
ctgcatgccgatcgcacccaggccgatcgccttcgggcggtcgagggcttcaagtcgggc
acccatcgcgtcctcgtcgccacggacatcgccgcccgcggcctcgatatcgacgcgatc
gagacggtggtgaacttcgaggtgccgttcaatcgcgaggggtacgtgcaccgcgtcggc
cgggccgggcgcgccgggtccacggggaccgcgatcacgctcgtgtcgccggacgagcgg
cacgacatggaagaaatcgctgacgcgttcggcctggtgctgttcgaggacgcccacgct
gaactcgtcgaagccggcgaagcgatcgacggtgccctgccgccagtcgagacggcgagc
gtcgccgctgagcgcccgcggcgcccgcgcacgcgacgcccgcgcgcgtcggaaccggct
gcgacacccgcggtcgcggacgtggcgtcagaggccacgtcgtctccgcaggagagtgag
acgaccgacacagccgctgacacgccggccgaggacgggaccggcgacgcggcccggaag
cgccgccggcggcgtcgacgtcgcagcggtccgaagtccgacgagacagtcgagggcgac
ggctcgccccccgaggccaccggcaacggcagcgacgagagcggcgagccctag
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