Luteitalea pratensis: LuPra_03270
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Entry
LuPra_03270 CDS
T04394
Symbol
rluD_1
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
abac
Luteitalea pratensis
Brite
KEGG Orthology (KO) [BR:
abac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
abac03009
]
LuPra_03270 (rluD_1)
Enzymes [BR:
abac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
LuPra_03270 (rluD_1)
Ribosome biogenesis [BR:
abac03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LuPra_03270 (rluD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
gpW
Motif
Other DBs
NCBI-ProteinID:
AMY10042
UniProt:
A0A143PN73
LinkDB
All DBs
Position
complement(3987722..3988708)
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AA seq
328 aa
AA seq
DB search
MAFALPYRIVKSDQTWGVSGDEEGQRLDKFLAAPGRAGSRSRAADAIARGRVFVDGEEVD
AAGGARVMRHGEQVRLWMDRPGSASRTPRPPVRDGLEIVHEDADLVVVNKAAGLLTVPLD
GDSSAPSVLALLWDRFRSHRTREPLVVHRIDKDTSGLVLFALHETARAALVAQFAHRTPD
RVYLALVNGHPDPAEGTWQDRLTWDEDAFVQRRSRADDPEARDAECAYRIVSTFAEASLL
EVRLRTGRQGQIRAQAQLHGHSLVGDRRYRPREGAPGHDLRFPRQALHAQRLAFDHPSDD
RRVEFTAPTPADLREFLDKLRRQARQGA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
ttggccttcgcgctaccctatcggatcgtgaagagcgaccagacctggggcgtgtcgggc
gacgaagaggggcagcgtctcgacaagttcctcgcggcaccgggtcgcgcgggatcgcgc
agccgcgccgccgatgcgatcgcacgcggccgtgtcttcgtggatggcgaagaggtcgat
gccgccggcggcgcccgcgtgatgcggcacggagaacaggtccggctctggatggaccgt
cccggctcggcctcgaggacccctcgcccaccggtccgcgacggcctcgaaatcgttcat
gaagacgcggatcttgtcgttgtcaacaaggcggcaggcctgctcaccgtcccgctcgat
ggcgacagctctgcgccgtcggtgctcgccctgctctgggaccgcttccgctcgcatcgg
acccgcgagccactggtcgtccatcgcatcgacaaggacacctcgggactcgtcctcttc
gcgctgcacgagaccgcccgcgccgcgctcgtggcgcagttcgcgcatcgcacaccggac
cgcgtctacctggcgctcgtgaatggccaccccgatcccgccgagggcacgtggcaggac
cggctcacctgggacgaggacgccttcgtccagcgacggtcccgtgcggacgacccggag
gccagggacgcggaatgcgcgtaccgcatcgtctccacgttcgccgaggcctcactgctc
gaagtccgcctgcgcaccggccggcagggacagatccgcgcgcaagcgcagttgcacggg
cattcgctggtcggcgatcgccgctaccgaccgcgcgagggtgcgccaggccacgacttg
cgatttcccaggcaggcgctgcacgcgcagcggctggcgttcgaccacccgtccgatgac
cgtcgggtggagttcacggcgccgacacccgccgacctgcgcgagttcctcgacaagttg
cggcggcaggctcgccagggagcgtag
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